Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BLOC1S4Q9NUP1 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 AC012617.1-204ENST00000586340 2305 ntBASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 AC099336.1-201ENST00000417053 1171 ntBASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 AC022210.1-201ENST00000449856 793 ntBASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 AC104989.1-201ENST00000519711 778 ntBASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BLOC1S4Q9NUP1 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 AC090505.1-201ENST00000430515 1834 ntBASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 AC152010.1-201ENST00000415779 2006 ntBASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 HIST2H2BB-201ENST00000449108 381 ntBASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 AP006547.1-201ENST00000563435 692 ntBASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BLOC1S4Q9NUP1 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms