Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 AL603764.1-201ENST00000636452 321 ntBASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 AC041040.2-201ENST00000622926 2899 ntBASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 AC092135.3-201ENST00000624151 1846 ntBASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.4□□□□□ -0.1
LRTM1Q9HBL6 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
LRTM1Q9HBL6 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 AC092552.1-201ENST00000547243 906 ntBASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 AL096865.1-201ENST00000606796 927 ntBASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LRTM1Q9HBL6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 SALL4P5-201ENST00000419001 1760 ntBASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 LRRC59-203ENST00000576448 1531 ntBASIC14.38□□□□□ -0.11
LRTM1Q9HBL6 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms