Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.54■□□□□ 0.4
RNF41Q9H4P4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF41Q9H4P4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.54■□□□□ 0.4
RNF41Q9H4P4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF41Q9H4P4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF41Q9H4P4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF41Q9H4P4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RNF41Q9H4P4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF41Q9H4P4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF41Q9H4P4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF41Q9H4P4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF41Q9H4P4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF41Q9H4P4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 BTBD6P1-201ENST00000412176 1267 ntBASIC17.53■□□□□ 0.4
RNF41Q9H4P4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 AL035414.1-201ENST00000451327 857 ntBASIC17.53■□□□□ 0.4
RNF41Q9H4P4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF41Q9H4P4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 MIR326-201ENST00000362220 95 ntBASIC17.52■□□□□ 0.4
RNF41Q9H4P4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 GOLGA2P4-201ENST00000441462 777 ntBASIC17.52■□□□□ 0.4
RNF41Q9H4P4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 RPSAP36-202ENST00000494591 1261 ntBASIC17.52■□□□□ 0.4
RNF41Q9H4P4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF41Q9H4P4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RNF41Q9H4P4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.52■□□□□ 0.39
RNF41Q9H4P4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms