Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 AC073621.1-201ENST00000392730 636 ntBASIC12.13□□□□□ -0.47
NKX6-2Q9C056 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 AC211429.1-201ENST00000415277 523 ntBASIC12.13□□□□□ -0.47
NKX6-2Q9C056 ATP5G2P1-201ENST00000433580 426 ntBASIC12.13□□□□□ -0.47
NKX6-2Q9C056 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX6-2Q9C056 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.12□□□□□ -0.47
NKX6-2Q9C056 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 AL513480.1-201ENST00000451731 511 ntBASIC12.12□□□□□ -0.47
NKX6-2Q9C056 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX6-2Q9C056 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms