Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 RN7SL357P-201ENST00000581065 298 ntBASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 MIR2392-201ENST00000584881 84 ntBASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 AC011471.3-201ENST00000623576 402 ntBASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 AC002044.2-201ENST00000624910 970 ntBASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 HELLS-212ENST00000630929 400 ntTSL 5 BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 AC006372.4-201ENST00000624122 1543 ntBASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 WASH3P-207ENST00000560956 1394 ntBASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
KRTAP4-1Q9BYQ7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 PPT1-215ENST00000641471 2368 ntBASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 CELP-201ENST00000411440 1249 ntTSL 5 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 ERP29P1-201ENST00000442902 706 ntBASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 AC024293.1-201ENST00000467930 498 ntBASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 TREHP1-201ENST00000531328 465 ntBASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 NAA40-205ENST00000539656 577 ntTSL 4 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 AC138701.2-201ENST00000553634 226 ntBASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 ELP5-212ENST00000574255 671 ntTSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 AC073592.2-201ENST00000623062 780 ntBASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
KRTAP4-1Q9BYQ7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms