Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 HOMER2P2-201ENST00000451621 847 ntBASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 Z93015.1-201ENST00000451718 390 ntBASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 FTLP10-202ENST00000505798 471 ntBASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 AC026434.2-201ENST00000506094 1078 ntBASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 COX5BP1-201ENST00000507622 393 ntBASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 OR10B1P-201ENST00000601666 907 ntBASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 LILRP1-201ENST00000444199 1370 ntBASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SSBP3Q9BWW4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 AP000845.1-201ENST00000581677 2131 ntBASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 AC026748.1-201ENST00000624349 3251 ntBASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 ACTBP11-201ENST00000436287 1126 ntBASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 PFN1P12-201ENST00000455938 534 ntBASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 RPL13AP20-201ENST00000459725 609 ntBASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 MIR4741-201ENST00000579822 90 ntBASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 AC006486.2-201ENST00000624246 2199 ntBASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 CICP24-201ENST00000605464 2705 ntBASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP3Q9BWW4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP3Q9BWW4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms