Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 GOLGA8UP-201ENST00000527159 1755 ntBASIC19.07■□□□□ 0.64
ABCA3Q99758 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ABCA3Q99758 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA3Q99758 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA3Q99758 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA3Q99758 ABCD1P4-201ENST00000399687 604 ntBASIC19.07■□□□□ 0.64
ABCA3Q99758 RNLS-203ENST00000437752 525 ntTSL 2 BASIC19.07■□□□□ 0.64
ABCA3Q99758 KRT18P62-201ENST00000446618 1287 ntBASIC19.07■□□□□ 0.64
ABCA3Q99758 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA3Q99758 HNRNPA1P42-201ENST00000458678 957 ntBASIC19.07■□□□□ 0.64
ABCA3Q99758 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC19.07■□□□□ 0.64
ABCA3Q99758 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC19.07■□□□□ 0.64
ABCA3Q99758 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC19.07■□□□□ 0.64
ABCA3Q99758 AL359219.1-201ENST00000556311 934 ntBASIC19.07■□□□□ 0.64
ABCA3Q99758 SORD2P-201ENST00000558556 1069 ntBASIC19.07■□□□□ 0.64
ABCA3Q99758 CES1P2-201ENST00000566467 1242 ntBASIC19.07■□□□□ 0.64
ABCA3Q99758 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC19.07■□□□□ 0.64
ABCA3Q99758 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC19.07■□□□□ 0.64
ABCA3Q99758 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA3Q99758 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.07■□□□□ 0.64
ABCA3Q99758 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA3Q99758 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA3Q99758 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA3Q99758 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ABCA3Q99758 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCA3Q99758 AC007952.5-201ENST00000572818 1486 ntBASIC19.07■□□□□ 0.64
ABCA3Q99758 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ABCA3Q99758 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.06■□□□□ 0.64
ABCA3Q99758 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC19.06■□□□□ 0.64
ABCA3Q99758 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ABCA3Q99758 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC19.06■□□□□ 0.64
ABCA3Q99758 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ABCA3Q99758 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ABCA3Q99758 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA3Q99758 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC19.06■□□□□ 0.64
ABCA3Q99758 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC19.06■□□□□ 0.64
ABCA3Q99758 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC19.06■□□□□ 0.64
ABCA3Q99758 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC19.06■□□□□ 0.64
ABCA3Q99758 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC19.06■□□□□ 0.64
ABCA3Q99758 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA3Q99758 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC19.06■□□□□ 0.64
ABCA3Q99758 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC19.06■□□□□ 0.64
ABCA3Q99758 AC010531.8-201ENST00000623341 685 ntBASIC19.06■□□□□ 0.64
ABCA3Q99758 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC19.06■□□□□ 0.64
ABCA3Q99758 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC19.06■□□□□ 0.64
ABCA3Q99758 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC19.06■□□□□ 0.64
ABCA3Q99758 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA3Q99758 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA3Q99758 SARS-202ENST00000369923 1882 ntTSL 5 BASIC19.06■□□□□ 0.64
ABCA3Q99758 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA3Q99758 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA3Q99758 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA3Q99758 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC19.05■□□□□ 0.64
ABCA3Q99758 OR7E115P-201ENST00000382617 1024 ntBASIC19.05■□□□□ 0.64
ABCA3Q99758 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ABCA3Q99758 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCA3Q99758 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCA3Q99758 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
ABCA3Q99758 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC19.05■□□□□ 0.64
ABCA3Q99758 RN7SL351P-201ENST00000469306 248 ntBASIC19.05■□□□□ 0.64
ABCA3Q99758 AC093300.1-201ENST00000510368 1201 ntBASIC19.05■□□□□ 0.64
ABCA3Q99758 AC092612.1-201ENST00000514501 998 ntBASIC19.05■□□□□ 0.64
ABCA3Q99758 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC19.05■□□□□ 0.64
ABCA3Q99758 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA3Q99758 MIR4746-201ENST00000579802 71 ntBASIC19.05■□□□□ 0.64
ABCA3Q99758 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC19.05■□□□□ 0.64
ABCA3Q99758 BX322534.1-201ENST00000635574 241 ntBASIC19.05■□□□□ 0.64
ABCA3Q99758 AC215524.1-201ENST00000635696 241 ntBASIC19.05■□□□□ 0.64
ABCA3Q99758 AC110057.1-201ENST00000636031 898 ntBASIC19.05■□□□□ 0.64
ABCA3Q99758 AC136621.1-201ENST00000624017 2304 ntBASIC19.05■□□□□ 0.64
ABCA3Q99758 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCA3Q99758 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCA3Q99758 LINC00115-201ENST00000473798 1317 ntBASIC19.05■□□□□ 0.64
ABCA3Q99758 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA3Q99758 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCA3Q99758 WASH7P-201ENST00000488147 1351 ntBASIC19.05■□□□□ 0.64
ABCA3Q99758 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ABCA3Q99758 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ABCA3Q99758 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCA3Q99758 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA3Q99758 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC19.05■□□□□ 0.64
ABCA3Q99758 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCA3Q99758 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA3Q99758 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA3Q99758 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ABCA3Q99758 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA3Q99758 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA3Q99758 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA3Q99758 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA3Q99758 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ABCA3Q99758 FAM21EP-201ENST00000417804 985 ntBASIC19.05■□□□□ 0.64
ABCA3Q99758 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC19.05■□□□□ 0.64
ABCA3Q99758 AC010900.1-201ENST00000449849 1296 ntBASIC19.05■□□□□ 0.64
ABCA3Q99758 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC19.05■□□□□ 0.64
ABCA3Q99758 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC19.05■□□□□ 0.64
ABCA3Q99758 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA3Q99758 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC19.05■□□□□ 0.64
ABCA3Q99758 AC120498.7-201ENST00000562876 330 ntBASIC19.05■□□□□ 0.64
ABCA3Q99758 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA3Q99758 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms