Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.17□□□□□ -0.46
RAB40CQ96S21 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RAB40CQ96S21 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 AC092053.3-201ENST00000641308 4975 ntBASIC12.16□□□□□ -0.46
RAB40CQ96S21 ELL2P1-201ENST00000413990 1906 ntBASIC12.16□□□□□ -0.46
RAB40CQ96S21 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 ALG1L5P-201ENST00000482043 771 ntBASIC12.16□□□□□ -0.46
RAB40CQ96S21 AC112482.1-201ENST00000492080 688 ntBASIC12.16□□□□□ -0.46
RAB40CQ96S21 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 ALG1L8P-201ENST00000533887 760 ntBASIC12.16□□□□□ -0.46
RAB40CQ96S21 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 AC003101.2-201ENST00000612557 442 ntBASIC12.16□□□□□ -0.46
RAB40CQ96S21 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RAB40CQ96S21 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
RAB40CQ96S21 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.15□□□□□ -0.46
RAB40CQ96S21 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 PCDHA5-203ENST00000614258 4248 ntBASIC12.15□□□□□ -0.46
RAB40CQ96S21 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
RAB40CQ96S21 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms