Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 CSF2RBP1-201ENST00000447905 391 ntBASIC12.39□□□□□ -0.43
GAFA1Q96PS6 HOMER2P2-201ENST00000451621 847 ntBASIC12.39□□□□□ -0.43
GAFA1Q96PS6 ALG3P1-201ENST00000508806 1114 ntBASIC12.39□□□□□ -0.43
GAFA1Q96PS6 AC022447.6-201ENST00000515522 438 ntBASIC12.39□□□□□ -0.43
GAFA1Q96PS6 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 AP006547.1-201ENST00000563435 692 ntBASIC12.39□□□□□ -0.43
GAFA1Q96PS6 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.39□□□□□ -0.43
GAFA1Q96PS6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 MIR4259-201ENST00000584466 101 ntBASIC12.39□□□□□ -0.43
GAFA1Q96PS6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 OR2I1P-209ENST00000641730 5365 ntBASIC12.39□□□□□ -0.43
GAFA1Q96PS6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAFA1Q96PS6 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 BX088702.1-201ENST00000610784 235 ntBASIC12.38□□□□□ -0.43
GAFA1Q96PS6 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
GAFA1Q96PS6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GAFA1Q96PS6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms