Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 AL139094.1-201ENST00000405549 1188 ntBASIC14.47□□□□□ -0.09
RNF31Q96EP0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 AC004945.1-201ENST00000416738 983 ntBASIC14.47□□□□□ -0.09
RNF31Q96EP0 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 AC004066.1-201ENST00000502488 802 ntBASIC14.47□□□□□ -0.09
RNF31Q96EP0 AL391280.1-201ENST00000506969 1062 ntBASIC14.47□□□□□ -0.09
RNF31Q96EP0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 DUX4L45-201ENST00000566406 1057 ntBASIC14.47□□□□□ -0.09
RNF31Q96EP0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 SAMD11P1-201ENST00000571429 661 ntBASIC14.47□□□□□ -0.09
RNF31Q96EP0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.47□□□□□ -0.09
RNF31Q96EP0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF31Q96EP0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 CICP14-201ENST00000629111 2732 ntBASIC14.46□□□□□ -0.09
RNF31Q96EP0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 AL022328.3-201ENST00000607943 679 ntBASIC14.46□□□□□ -0.09
RNF31Q96EP0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.46□□□□□ -0.09
RNF31Q96EP0 ENPP7P14-201ENST00000621765 1040 ntBASIC14.46□□□□□ -0.09
RNF31Q96EP0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF31Q96EP0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
RNF31Q96EP0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
RNF31Q96EP0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RNF31Q96EP0 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms