Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.74□□□□□ -0.37
USP9XQ93008 AC027612.2-202ENST00000445955 1199 ntBASIC12.74□□□□□ -0.37
USP9XQ93008 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.74□□□□□ -0.37
USP9XQ93008 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC12.74□□□□□ -0.37
USP9XQ93008 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC12.74□□□□□ -0.37
USP9XQ93008 AC006116.2-201ENST00000589958 988 ntBASIC12.74□□□□□ -0.37
USP9XQ93008 APOC1-209ENST00000592885 562 ntTSL 3 BASIC12.74□□□□□ -0.37
USP9XQ93008 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
USP9XQ93008 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC12.74□□□□□ -0.37
USP9XQ93008 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
USP9XQ93008 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC12.73□□□□□ -0.37
USP9XQ93008 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC12.73□□□□□ -0.37
USP9XQ93008 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 AC006504.5-208ENST00000588784 2401 ntBASIC12.73□□□□□ -0.37
USP9XQ93008 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.73□□□□□ -0.37
USP9XQ93008 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.73□□□□□ -0.37
USP9XQ93008 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.73□□□□□ -0.37
USP9XQ93008 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
USP9XQ93008 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 AC073869.2-201ENST00000417338 1026 ntBASIC12.73□□□□□ -0.37
USP9XQ93008 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC12.73□□□□□ -0.37
USP9XQ93008 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.73□□□□□ -0.37
USP9XQ93008 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC12.73□□□□□ -0.37
USP9XQ93008 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.73□□□□□ -0.37
USP9XQ93008 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.73□□□□□ -0.37
USP9XQ93008 AC023968.2-201ENST00000560593 1049 ntBASIC12.73□□□□□ -0.37
USP9XQ93008 COX5A-205ENST00000568517 582 ntTSL 3 BASIC12.73□□□□□ -0.37
USP9XQ93008 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
USP9XQ93008 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.73□□□□□ -0.37
USP9XQ93008 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
USP9XQ93008 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
USP9XQ93008 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.73□□□□□ -0.37
USP9XQ93008 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
USP9XQ93008 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.73□□□□□ -0.37
USP9XQ93008 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
USP9XQ93008 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
USP9XQ93008 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
USP9XQ93008 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.73□□□□□ -0.37
USP9XQ93008 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.73□□□□□ -0.37
USP9XQ93008 PPP1R2P4-201ENST00000424051 595 ntBASIC12.73□□□□□ -0.37
USP9XQ93008 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
USP9XQ93008 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.73□□□□□ -0.37
USP9XQ93008 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC12.73□□□□□ -0.37
USP9XQ93008 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.73□□□□□ -0.37
USP9XQ93008 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC12.72□□□□□ -0.37
USP9XQ93008 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.72□□□□□ -0.37
USP9XQ93008 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC12.72□□□□□ -0.37
USP9XQ93008 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
USP9XQ93008 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC12.72□□□□□ -0.37
USP9XQ93008 AC136604.1-202ENST00000425471 771 ntBASIC12.72□□□□□ -0.37
USP9XQ93008 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC12.72□□□□□ -0.37
USP9XQ93008 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.72□□□□□ -0.37
USP9XQ93008 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC12.72□□□□□ -0.37
USP9XQ93008 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.72□□□□□ -0.37
USP9XQ93008 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
USP9XQ93008 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
USP9XQ93008 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.72□□□□□ -0.37
USP9XQ93008 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms