Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.45□□□□□ -0.42
ZNF439Q8NDP4 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 AL139094.1-201ENST00000405549 1188 ntBASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 AC087499.6-201ENST00000411576 835 ntBASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 AL359711.2-201ENST00000563105 872 ntBASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 RN7SL204P-201ENST00000582831 262 ntBASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 LINC02560-201ENST00000596379 459 ntBASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 CHCHD2P3-201ENST00000603038 451 ntBASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 AC008761.3-201ENST00000624803 892 ntBASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 AC007541.1-201ENST00000570282 1469 ntBASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 AL137783.1-201ENST00000623494 1896 ntBASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF439Q8NDP4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 SOCS2P1-201ENST00000417727 557 ntBASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 API5-211ENST00000534695 560 ntTSL 5 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 AC004233.3-201ENST00000607794 1269 ntBASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF439Q8NDP4 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms