Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 AL360270.3-201ENST00000609118 1348 ntBASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 TCAF1P1-201ENST00000414990 2232 ntBASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLIP4Q8N3C7 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 AC007787.1-201ENST00000588095 1583 ntBASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 AL512638.1-201ENST00000457493 794 ntBASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 AC004066.1-201ENST00000502488 802 ntBASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 AC006538.3-201ENST00000612495 578 ntBASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIP4Q8N3C7 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLIP4Q8N3C7 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLIP4Q8N3C7 AC018442.1-201ENST00000421439 2061 ntBASIC14.08□□□□□ -0.15
CLIP4Q8N3C7 DRD5P1-201ENST00000456605 1438 ntBASIC14.08□□□□□ -0.15
CLIP4Q8N3C7 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.08□□□□□ -0.16
CLIP4Q8N3C7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms