Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APLFQ8IW19 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
APLFQ8IW19 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APLFQ8IW19 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
APLFQ8IW19 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.93□□□□□ -0.02
APLFQ8IW19 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
APLFQ8IW19 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.93□□□□□ -0.02
APLFQ8IW19 AL589987.1-201ENST00000453380 819 ntBASIC14.93□□□□□ -0.02
APLFQ8IW19 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APLFQ8IW19 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.93□□□□□ -0.02
APLFQ8IW19 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.93□□□□□ -0.02
APLFQ8IW19 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APLFQ8IW19 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
APLFQ8IW19 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
APLFQ8IW19 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APLFQ8IW19 TIMM17BP1-201ENST00000545713 516 ntBASIC14.93□□□□□ -0.02
APLFQ8IW19 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
APLFQ8IW19 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.93□□□□□ -0.02
APLFQ8IW19 AP005482.1-201ENST00000563722 1273 ntBASIC14.93□□□□□ -0.02
APLFQ8IW19 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.93□□□□□ -0.02
APLFQ8IW19 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
APLFQ8IW19 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.93□□□□□ -0.02
APLFQ8IW19 AL512343.1-201ENST00000605837 169 ntBASIC14.93□□□□□ -0.02
APLFQ8IW19 AL365330.1-201ENST00000607459 531 ntBASIC14.93□□□□□ -0.02
APLFQ8IW19 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
APLFQ8IW19 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APLFQ8IW19 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APLFQ8IW19 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
APLFQ8IW19 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.93□□□□□ -0.02
APLFQ8IW19 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APLFQ8IW19 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APLFQ8IW19 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.93□□□□□ -0.02
APLFQ8IW19 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
APLFQ8IW19 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APLFQ8IW19 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APLFQ8IW19 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.93□□□□□ -0.02
APLFQ8IW19 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
APLFQ8IW19 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.93□□□□□ -0.02
APLFQ8IW19 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APLFQ8IW19 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APLFQ8IW19 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
APLFQ8IW19 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.92□□□□□ -0.02
APLFQ8IW19 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.92□□□□□ -0.02
APLFQ8IW19 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
APLFQ8IW19 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.92□□□□□ -0.02
APLFQ8IW19 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.92□□□□□ -0.02
APLFQ8IW19 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
APLFQ8IW19 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.92□□□□□ -0.02
APLFQ8IW19 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.92□□□□□ -0.02
APLFQ8IW19 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
APLFQ8IW19 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 AC005562.1-201ENST00000583030 3219 ntBASIC14.92□□□□□ -0.02
APLFQ8IW19 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
APLFQ8IW19 AC098850.1-201ENST00000419919 790 ntBASIC14.92□□□□□ -0.02
APLFQ8IW19 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.92□□□□□ -0.02
APLFQ8IW19 RARRES2P5-201ENST00000564013 466 ntBASIC14.92□□□□□ -0.02
APLFQ8IW19 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.92□□□□□ -0.02
APLFQ8IW19 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.92□□□□□ -0.02
APLFQ8IW19 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.92□□□□□ -0.02
APLFQ8IW19 AC025048.3-201ENST00000590609 569 ntBASIC14.92□□□□□ -0.02
APLFQ8IW19 AC015936.2-201ENST00000593177 259 ntBASIC14.92□□□□□ -0.02
APLFQ8IW19 AC005702.4-201ENST00000618393 416 ntBASIC14.92□□□□□ -0.02
APLFQ8IW19 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.92□□□□□ -0.02
APLFQ8IW19 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 AP003680.1-201ENST00000598970 3660 ntBASIC14.92□□□□□ -0.02
APLFQ8IW19 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
APLFQ8IW19 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
APLFQ8IW19 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APLFQ8IW19 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
APLFQ8IW19 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
APLFQ8IW19 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
APLFQ8IW19 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APLFQ8IW19 AC073869.1-201ENST00000415574 2762 ntBASIC14.91□□□□□ -0.02
APLFQ8IW19 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APLFQ8IW19 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.91□□□□□ -0.02
APLFQ8IW19 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APLFQ8IW19 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APLFQ8IW19 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APLFQ8IW19 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APLFQ8IW19 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APLFQ8IW19 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
APLFQ8IW19 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms