Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RAB11FIP4Q86YS3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 MIR1909-201ENST00000411312 80 ntBASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 ACA64.2-201ENST00000459014 129 ntBASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 AC138466.3-201ENST00000619983 221 ntBASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB11FIP4Q86YS3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 FKBP4P6-201ENST00000457486 1332 ntBASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 MIR1202-201ENST00000408529 83 ntBASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 AC234783.1-201ENST00000441761 496 ntBASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 MIR4259-201ENST00000584466 101 ntBASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 OR10B1P-201ENST00000601666 907 ntBASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB11FIP4Q86YS3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
RAB11FIP4Q86YS3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.52■□□□□ 0.39
RAB11FIP4Q86YS3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RAB11FIP4Q86YS3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.39
RAB11FIP4Q86YS3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
RAB11FIP4Q86YS3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.52■□□□□ 0.39
RAB11FIP4Q86YS3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.52■□□□□ 0.39
RAB11FIP4Q86YS3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAB11FIP4Q86YS3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RAB11FIP4Q86YS3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RAB11FIP4Q86YS3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAB11FIP4Q86YS3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RAB11FIP4Q86YS3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.52■□□□□ 0.39
RAB11FIP4Q86YS3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB11FIP4Q86YS3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB11FIP4Q86YS3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms