Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 AC012441.1-201ENST00000446669 685 ntBASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 AC009486.1-201ENST00000569860 813 ntBASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 MIR3197-201ENST00000582241 73 ntBASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 AC004466.1-201ENST00000599515 1080 ntBASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 MTHFR-210ENST00000641407 2387 ntBASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
NHLRC1Q6VVB1 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NHLRC1Q6VVB1 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NHLRC1Q6VVB1 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
NHLRC1Q6VVB1 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
NHLRC1Q6VVB1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NHLRC1Q6VVB1 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
NHLRC1Q6VVB1 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.46□□□□□ -0.26
NHLRC1Q6VVB1 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 AC098614.1-201ENST00000368528 745 ntBASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 AP005018.1-201ENST00000525475 301 ntBASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 AL596325.1-201ENST00000563991 1082 ntBASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 MIR5189-201ENST00000577370 114 ntBASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 AC018665.1-201ENST00000622927 1362 ntBASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 OR2I1P-209ENST00000641730 5365 ntBASIC13.45□□□□□ -0.26
NHLRC1Q6VVB1 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 AL138709.1-201ENST00000614840 1693 ntBASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 BAATP1-201ENST00000412284 1225 ntBASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 RN7SL837P-201ENST00000463010 287 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms