Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 AL590440.2-201ENST00000641973 1595 ntBASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 AC015818.8-201ENST00000587907 1519 ntBASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDKAL1Q5VV42 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 CLUHP2-201ENST00000426660 1303 ntBASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 MESTP3-201ENST00000503460 968 ntBASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 AC022137.2-201ENST00000503482 481 ntBASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 ENPP7P5-201ENST00000541031 1031 ntBASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 AP001063.1-201ENST00000568332 529 ntBASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKAL1Q5VV42 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.27■□□□□ 0.19
CDKAL1Q5VV42 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDKAL1Q5VV42 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDKAL1Q5VV42 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDKAL1Q5VV42 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDKAL1Q5VV42 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDKAL1Q5VV42 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.27■□□□□ 0.19
CDKAL1Q5VV42 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDKAL1Q5VV42 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDKAL1Q5VV42 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.27■□□□□ 0.19
CDKAL1Q5VV42 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDKAL1Q5VV42 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDKAL1Q5VV42 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDKAL1Q5VV42 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 BX088702.1-201ENST00000610784 235 ntBASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 OR2I1P-210ENST00000642037 4691 ntBASIC16.26■□□□□ 0.19
CDKAL1Q5VV42 MYO15B-237ENST00000642007 4893 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms