Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 AC084364.1-201ENST00000551967 1556 ntBASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 AL353779.1-201ENST00000434793 351 ntBASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 AC092364.2-202ENST00000597012 1073 ntBASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 AL158212.4-201ENST00000624062 1286 ntBASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 AC089987.1-201ENST00000551654 2209 ntBASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
ATPAF1Q5TC12 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 CICP20-201ENST00000443330 2801 ntBASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 MIR661-201ENST00000384842 89 ntBASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 AC087499.6-201ENST00000411576 835 ntBASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 AC055876.2-201ENST00000531834 546 ntBASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 AC023310.3-201ENST00000557027 670 ntBASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 AC100756.1-201ENST00000562736 682 ntBASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 AC138749.3-201ENST00000567691 622 ntBASIC13.03□□□□□ -0.32
ATPAF1Q5TC12 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms