Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.85■□□□□ 0.45
RFX7Q2KHR2 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 KRT8P19-201ENST00000551916 1455 ntBASIC17.85■□□□□ 0.45
RFX7Q2KHR2 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 ACTG1P2-201ENST00000415776 1125 ntBASIC17.85■□□□□ 0.45
RFX7Q2KHR2 ACTG1P11-201ENST00000425411 1125 ntBASIC17.85■□□□□ 0.45
RFX7Q2KHR2 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 RN7SL574P-201ENST00000581512 297 ntBASIC17.85■□□□□ 0.45
RFX7Q2KHR2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 AC026740.1-201ENST00000607068 791 ntBASIC17.85■□□□□ 0.45
RFX7Q2KHR2 AC097724.1-201ENST00000609581 426 ntBASIC17.85■□□□□ 0.45
RFX7Q2KHR2 AL136301.1-201ENST00000615830 422 ntBASIC17.85■□□□□ 0.45
RFX7Q2KHR2 AC068587.8-201ENST00000641239 219 ntBASIC17.85■□□□□ 0.45
RFX7Q2KHR2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 E2F3P2-201ENST00000447755 1422 ntBASIC17.85■□□□□ 0.45
RFX7Q2KHR2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFX7Q2KHR2 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 AL662890.1-201ENST00000396818 632 ntBASIC17.84■□□□□ 0.45
RFX7Q2KHR2 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 RNMTL1P1-201ENST00000454103 560 ntBASIC17.84■□□□□ 0.45
RFX7Q2KHR2 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 TUBBP5-203ENST00000508529 1334 ntBASIC17.84■□□□□ 0.45
RFX7Q2KHR2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RFX7Q2KHR2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RFX7Q2KHR2 AC090505.1-201ENST00000430515 1834 ntBASIC17.83■□□□□ 0.45
RFX7Q2KHR2 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFX7Q2KHR2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RFX7Q2KHR2 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFX7Q2KHR2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFX7Q2KHR2 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RFX7Q2KHR2 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.83■□□□□ 0.45
RFX7Q2KHR2 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.83■□□□□ 0.45
RFX7Q2KHR2 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFX7Q2KHR2 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.83■□□□□ 0.45
RFX7Q2KHR2 MARK2P5-201ENST00000507649 634 ntBASIC17.83■□□□□ 0.45
RFX7Q2KHR2 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.83■□□□□ 0.45
RFX7Q2KHR2 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms