Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 SCARNA20.5-201ENST00000516991 142 ntBASIC12.72□□□□□ -0.37
EFNB3Q15768 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.72□□□□□ -0.37
EFNB3Q15768 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB3Q15768 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB3Q15768 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.72□□□□□ -0.37
EFNB3Q15768 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.72□□□□□ -0.37
EFNB3Q15768 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
EFNB3Q15768 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.72□□□□□ -0.37
EFNB3Q15768 AC020914.3-201ENST00000594712 304 ntBASIC12.72□□□□□ -0.37
EFNB3Q15768 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB3Q15768 BX088702.1-201ENST00000610784 235 ntBASIC12.72□□□□□ -0.37
EFNB3Q15768 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB3Q15768 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
EFNB3Q15768 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.72□□□□□ -0.37
EFNB3Q15768 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.72□□□□□ -0.37
EFNB3Q15768 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
EFNB3Q15768 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB3Q15768 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.72□□□□□ -0.37
EFNB3Q15768 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.72□□□□□ -0.37
EFNB3Q15768 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
EFNB3Q15768 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.72□□□□□ -0.37
EFNB3Q15768 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
EFNB3Q15768 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.71□□□□□ -0.37
EFNB3Q15768 SALL4P5-201ENST00000419001 1760 ntBASIC12.71□□□□□ -0.37
EFNB3Q15768 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB3Q15768 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB3Q15768 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
EFNB3Q15768 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB3Q15768 AC009093.2-202ENST00000620513 2079 ntBASIC12.71□□□□□ -0.37
EFNB3Q15768 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB3Q15768 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.71□□□□□ -0.37
EFNB3Q15768 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.71□□□□□ -0.37
EFNB3Q15768 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
EFNB3Q15768 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB3Q15768 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
EFNB3Q15768 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB3Q15768 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB3Q15768 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB3Q15768 C8orf49-201ENST00000525043 1968 ntBASIC12.71□□□□□ -0.37
EFNB3Q15768 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB3Q15768 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.71□□□□□ -0.37
EFNB3Q15768 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB3Q15768 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB3Q15768 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB3Q15768 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB3Q15768 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.71□□□□□ -0.37
EFNB3Q15768 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB3Q15768 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.71□□□□□ -0.37
EFNB3Q15768 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.71□□□□□ -0.37
EFNB3Q15768 SERPINA13P-202ENST00000478994 924 ntBASIC12.71□□□□□ -0.37
EFNB3Q15768 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB3Q15768 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.71□□□□□ -0.37
EFNB3Q15768 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.71□□□□□ -0.37
EFNB3Q15768 AC131206.1-201ENST00000538078 1211 ntBASIC12.71□□□□□ -0.37
EFNB3Q15768 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB3Q15768 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.71□□□□□ -0.37
EFNB3Q15768 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.71□□□□□ -0.37
EFNB3Q15768 DUX4L46-201ENST00000566845 751 ntBASIC12.71□□□□□ -0.37
EFNB3Q15768 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
EFNB3Q15768 AC009955.4-201ENST00000597192 544 ntBASIC12.71□□□□□ -0.37
EFNB3Q15768 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.71□□□□□ -0.37
EFNB3Q15768 AL162426.1-201ENST00000624141 743 ntBASIC12.71□□□□□ -0.37
EFNB3Q15768 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
EFNB3Q15768 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.71□□□□□ -0.37
EFNB3Q15768 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.71□□□□□ -0.37
EFNB3Q15768 AC020910.5-201ENST00000623668 1865 ntBASIC12.71□□□□□ -0.37
EFNB3Q15768 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.71□□□□□ -0.37
EFNB3Q15768 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.71□□□□□ -0.37
EFNB3Q15768 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
EFNB3Q15768 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.71□□□□□ -0.37
EFNB3Q15768 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.71□□□□□ -0.38
EFNB3Q15768 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
EFNB3Q15768 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
EFNB3Q15768 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.71□□□□□ -0.38
EFNB3Q15768 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
EFNB3Q15768 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
EFNB3Q15768 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
EFNB3Q15768 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
EFNB3Q15768 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
EFNB3Q15768 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
EFNB3Q15768 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.71□□□□□ -0.38
EFNB3Q15768 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.71□□□□□ -0.38
EFNB3Q15768 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
EFNB3Q15768 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
EFNB3Q15768 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
EFNB3Q15768 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms