Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.4■□□□□ 0.22
UBXN1Q04323 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.4■□□□□ 0.22
UBXN1Q04323 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.4■□□□□ 0.22
UBXN1Q04323 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.4■□□□□ 0.22
UBXN1Q04323 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.4■□□□□ 0.22
UBXN1Q04323 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.4■□□□□ 0.22
UBXN1Q04323 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.4■□□□□ 0.22
UBXN1Q04323 AL390955.2-201ENST00000603032 514 ntBASIC16.4■□□□□ 0.22
UBXN1Q04323 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.4■□□□□ 0.22
UBXN1Q04323 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.4■□□□□ 0.22
UBXN1Q04323 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.4■□□□□ 0.22
UBXN1Q04323 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.4■□□□□ 0.22
UBXN1Q04323 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.4■□□□□ 0.22
UBXN1Q04323 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.4■□□□□ 0.22
UBXN1Q04323 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBXN1Q04323 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.4■□□□□ 0.22
UBXN1Q04323 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBXN1Q04323 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.4■□□□□ 0.22
UBXN1Q04323 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.4■□□□□ 0.22
UBXN1Q04323 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBXN1Q04323 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBXN1Q04323 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBXN1Q04323 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
UBXN1Q04323 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBXN1Q04323 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBXN1Q04323 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBXN1Q04323 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBXN1Q04323 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBXN1Q04323 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBXN1Q04323 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
UBXN1Q04323 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
UBXN1Q04323 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBXN1Q04323 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.39■□□□□ 0.21
UBXN1Q04323 AC011474.4-201ENST00000623523 2076 ntBASIC16.39■□□□□ 0.21
UBXN1Q04323 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBXN1Q04323 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBXN1Q04323 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.39■□□□□ 0.21
UBXN1Q04323 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBXN1Q04323 AC012617.1-204ENST00000586340 2305 ntBASIC16.39■□□□□ 0.21
UBXN1Q04323 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBXN1Q04323 SPDYE19P-201ENST00000338590 713 ntBASIC16.39■□□□□ 0.21
UBXN1Q04323 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
UBXN1Q04323 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.39■□□□□ 0.21
UBXN1Q04323 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.39■□□□□ 0.21
UBXN1Q04323 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBXN1Q04323 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.39■□□□□ 0.21
UBXN1Q04323 AL512638.1-201ENST00000457493 794 ntBASIC16.39■□□□□ 0.21
UBXN1Q04323 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBXN1Q04323 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBXN1Q04323 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.39■□□□□ 0.21
UBXN1Q04323 BRI3BPP1-201ENST00000594224 787 ntBASIC16.39■□□□□ 0.21
UBXN1Q04323 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.39■□□□□ 0.21
UBXN1Q04323 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.39■□□□□ 0.21
UBXN1Q04323 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.39■□□□□ 0.21
UBXN1Q04323 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.39■□□□□ 0.21
UBXN1Q04323 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.39■□□□□ 0.21
UBXN1Q04323 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.39■□□□□ 0.21
UBXN1Q04323 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBXN1Q04323 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
UBXN1Q04323 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBXN1Q04323 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.39■□□□□ 0.21
UBXN1Q04323 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBXN1Q04323 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.39■□□□□ 0.21
UBXN1Q04323 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
UBXN1Q04323 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
UBXN1Q04323 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBXN1Q04323 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.39■□□□□ 0.21
UBXN1Q04323 AL359881.3-201ENST00000602640 1721 ntBASIC16.39■□□□□ 0.21
UBXN1Q04323 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
UBXN1Q04323 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.39■□□□□ 0.21
UBXN1Q04323 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBXN1Q04323 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBXN1Q04323 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.39■□□□□ 0.21
UBXN1Q04323 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.38■□□□□ 0.21
UBXN1Q04323 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBXN1Q04323 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.38■□□□□ 0.21
UBXN1Q04323 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBXN1Q04323 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
UBXN1Q04323 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
UBXN1Q04323 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBXN1Q04323 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
UBXN1Q04323 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.38■□□□□ 0.21
UBXN1Q04323 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBXN1Q04323 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBXN1Q04323 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBXN1Q04323 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.38■□□□□ 0.21
UBXN1Q04323 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBXN1Q04323 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBXN1Q04323 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.38■□□□□ 0.21
UBXN1Q04323 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
UBXN1Q04323 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBXN1Q04323 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
UBXN1Q04323 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.38■□□□□ 0.21
UBXN1Q04323 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBXN1Q04323 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.38■□□□□ 0.21
UBXN1Q04323 AC026434.2-201ENST00000506094 1078 ntBASIC16.38■□□□□ 0.21
UBXN1Q04323 SPDYE22P-201ENST00000582158 798 ntBASIC16.38■□□□□ 0.21
UBXN1Q04323 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.38■□□□□ 0.21
UBXN1Q04323 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBXN1Q04323 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms