Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SNRPFP62306 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
SNRPFP62306 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.14■□□□□ 0.17
SNRPFP62306 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.14■□□□□ 0.17
SNRPFP62306 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.14■□□□□ 0.17
SNRPFP62306 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.14■□□□□ 0.17
SNRPFP62306 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNRPFP62306 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 PKD1P5-201ENST00000532415 10291 ntBASIC16.13■□□□□ 0.17
SNRPFP62306 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.13■□□□□ 0.17
SNRPFP62306 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 AP002414.2-201ENST00000591780 3365 ntBASIC16.13■□□□□ 0.17
SNRPFP62306 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.13■□□□□ 0.17
SNRPFP62306 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SNRPFP62306 AC079178.1-201ENST00000420915 656 ntBASIC16.13■□□□□ 0.17
SNRPFP62306 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.13■□□□□ 0.17
SNRPFP62306 YBX1P6-201ENST00000442962 1002 ntBASIC16.13■□□□□ 0.17
SNRPFP62306 CICP12-201ENST00000455801 843 ntBASIC16.13■□□□□ 0.17
SNRPFP62306 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.13■□□□□ 0.17
SNRPFP62306 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.13■□□□□ 0.17
SNRPFP62306 RNA5SP412-201ENST00000516234 123 ntBASIC16.13■□□□□ 0.17
SNRPFP62306 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SNRPFP62306 HILS1-202ENST00000545329 423 ntBASIC16.13■□□□□ 0.17
SNRPFP62306 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
SNRPFP62306 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.13■□□□□ 0.17
SNRPFP62306 AC244157.2-201ENST00000616239 1006 ntBASIC16.13■□□□□ 0.17
SNRPFP62306 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.13■□□□□ 0.17
SNRPFP62306 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.13■□□□□ 0.17
SNRPFP62306 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.13■□□□□ 0.17
SNRPFP62306 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
SNRPFP62306 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.13■□□□□ 0.17
SNRPFP62306 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SNRPFP62306 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SNRPFP62306 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 KRT8P28-201ENST00000433288 1390 ntBASIC16.13■□□□□ 0.17
SNRPFP62306 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNRPFP62306 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRPFP62306 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SNRPFP62306 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SNRPFP62306 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRPFP62306 FLJ16779-201ENST00000612722 7638 ntBASIC16.12■□□□□ 0.17
SNRPFP62306 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SNRPFP62306 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SNRPFP62306 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.12■□□□□ 0.17
SNRPFP62306 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRPFP62306 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRPFP62306 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SNRPFP62306 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRPFP62306 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.12■□□□□ 0.17
SNRPFP62306 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SNRPFP62306 AC099336.1-201ENST00000417053 1171 ntBASIC16.12■□□□□ 0.17
SNRPFP62306 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.12■□□□□ 0.17
SNRPFP62306 HLA-V-201ENST00000429037 534 ntBASIC16.12■□□□□ 0.17
SNRPFP62306 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.12■□□□□ 0.17
SNRPFP62306 HIST2H2BB-201ENST00000449108 381 ntBASIC16.12■□□□□ 0.17
SNRPFP62306 AC119751.2-201ENST00000504529 210 ntBASIC16.12■□□□□ 0.17
SNRPFP62306 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.12■□□□□ 0.17
SNRPFP62306 SORD2P-201ENST00000558556 1069 ntBASIC16.12■□□□□ 0.17
SNRPFP62306 DUX4L46-201ENST00000566845 751 ntBASIC16.12■□□□□ 0.17
SNRPFP62306 AC239800.4-201ENST00000603712 296 ntBASIC16.12■□□□□ 0.17
SNRPFP62306 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.12■□□□□ 0.17
SNRPFP62306 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.12■□□□□ 0.17
SNRPFP62306 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRPFP62306 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SNRPFP62306 MYO15B-237ENST00000642007 4893 ntBASIC16.12■□□□□ 0.17
SNRPFP62306 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SNRPFP62306 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.12■□□□□ 0.17
SNRPFP62306 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.12■□□□□ 0.17
SNRPFP62306 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SNRPFP62306 AC215219.1-201ENST00000400706 1817 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms