Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CLDN8P56748 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.21□□□□□ -0.13
CLDN8P56748 AC138761.1-201ENST00000584393 385 ntBASIC14.21□□□□□ -0.13
CLDN8P56748 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.21□□□□□ -0.13
CLDN8P56748 AC133539.2-201ENST00000604757 467 ntBASIC14.21□□□□□ -0.13
CLDN8P56748 TMEM261P1-201ENST00000604899 340 ntBASIC14.21□□□□□ -0.13
CLDN8P56748 MIR6074-201ENST00000612054 107 ntBASIC14.21□□□□□ -0.13
CLDN8P56748 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN8P56748 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN8P56748 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN8P56748 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN8P56748 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.21□□□□□ -0.13
CLDN8P56748 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN8P56748 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN8P56748 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN8P56748 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.21□□□□□ -0.13
CLDN8P56748 RN7SL832P-201ENST00000607781 1756 ntBASIC14.21□□□□□ -0.13
CLDN8P56748 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN8P56748 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.21□□□□□ -0.14
CLDN8P56748 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
CLDN8P56748 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN8P56748 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN8P56748 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN8P56748 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN8P56748 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.14
CLDN8P56748 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN8P56748 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN8P56748 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.21□□□□□ -0.14
CLDN8P56748 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CLDN8P56748 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 AC011840.2-201ENST00000563063 1520 ntBASIC14.2□□□□□ -0.14
CLDN8P56748 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
CLDN8P56748 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CLDN8P56748 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN8P56748 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLDN8P56748 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CLDN8P56748 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 AC020910.6-201ENST00000623084 1459 ntBASIC14.2□□□□□ -0.14
CLDN8P56748 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLDN8P56748 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN8P56748 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN8P56748 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN8P56748 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLDN8P56748 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLDN8P56748 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLDN8P56748 DFFBP1-201ENST00000433250 979 ntBASIC14.2□□□□□ -0.14
CLDN8P56748 SPTLC1P1-201ENST00000447199 261 ntBASIC14.2□□□□□ -0.14
CLDN8P56748 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.2□□□□□ -0.14
CLDN8P56748 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.2□□□□□ -0.14
CLDN8P56748 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.2□□□□□ -0.14
CLDN8P56748 AC131206.1-201ENST00000538078 1211 ntBASIC14.2□□□□□ -0.14
CLDN8P56748 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN8P56748 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN8P56748 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN8P56748 AC009118.2-201ENST00000613275 655 ntBASIC14.2□□□□□ -0.14
CLDN8P56748 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLDN8P56748 AC005252.2-201ENST00000624630 1141 ntBASIC14.2□□□□□ -0.14
CLDN8P56748 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CLDN8P56748 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLDN8P56748 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLDN8P56748 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN8P56748 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLDN8P56748 AL391825.1-201ENST00000457671 1364 ntBASIC14.2□□□□□ -0.14
CLDN8P56748 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLDN8P56748 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.2□□□□□ -0.14
CLDN8P56748 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN8P56748 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN8P56748 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN8P56748 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms