Protein–RNA interactions for Protein: P56556

NDUFA6, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA6P56556 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC11.48□□□□□ -0.57
NDUFA6P56556 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA6P56556 AC148477.5-201ENST00000625164 1645 ntBASIC11.48□□□□□ -0.57
NDUFA6P56556 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA6P56556 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA6P56556 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA6P56556 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA6P56556 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA6P56556 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.48□□□□□ -0.57
NDUFA6P56556 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC11.48□□□□□ -0.57
NDUFA6P56556 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.48□□□□□ -0.57
NDUFA6P56556 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NDUFA6P56556 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA6P56556 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA6P56556 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA6P56556 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
NDUFA6P56556 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA6P56556 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA6P56556 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA6P56556 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.47□□□□□ -0.57
NDUFA6P56556 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
NDUFA6P56556 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC11.47□□□□□ -0.57
NDUFA6P56556 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
NDUFA6P56556 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 CARS-214ENST00000529772 2637 ntTSL 2 BASIC11.47□□□□□ -0.57
NDUFA6P56556 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC11.47□□□□□ -0.57
NDUFA6P56556 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC11.47□□□□□ -0.57
NDUFA6P56556 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.47□□□□□ -0.57
NDUFA6P56556 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.47□□□□□ -0.57
NDUFA6P56556 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
NDUFA6P56556 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
NDUFA6P56556 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC11.47□□□□□ -0.57
NDUFA6P56556 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.47□□□□□ -0.57
NDUFA6P56556 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
NDUFA6P56556 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
NDUFA6P56556 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.47□□□□□ -0.57
NDUFA6P56556 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC11.47□□□□□ -0.57
NDUFA6P56556 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11.47□□□□□ -0.57
NDUFA6P56556 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC11.47□□□□□ -0.57
NDUFA6P56556 GXYLT1P3-201ENST00000453058 1193 ntBASIC11.47□□□□□ -0.57
NDUFA6P56556 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC11.47□□□□□ -0.57
NDUFA6P56556 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC11.47□□□□□ -0.57
NDUFA6P56556 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
NDUFA6P56556 AC010947.1-201ENST00000623454 693 ntBASIC11.47□□□□□ -0.57
NDUFA6P56556 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
NDUFA6P56556 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
NDUFA6P56556 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC11.47□□□□□ -0.57
NDUFA6P56556 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
NDUFA6P56556 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
NDUFA6P56556 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC11.47□□□□□ -0.57
NDUFA6P56556 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 AL354702.1-201ENST00000442006 1960 ntBASIC11.47□□□□□ -0.57
NDUFA6P56556 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC11.47□□□□□ -0.57
NDUFA6P56556 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
NDUFA6P56556 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA6P56556 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA6P56556 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA6P56556 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA6P56556 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA6P56556 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA6P56556 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
NDUFA6P56556 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA6P56556 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA6P56556 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA6P56556 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
NDUFA6P56556 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
NDUFA6P56556 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
NDUFA6P56556 Z98257.2-202ENST00000641138 1548 ntBASIC11.46□□□□□ -0.57
NDUFA6P56556 LINC00638-201ENST00000555578 2518 ntBASIC11.46□□□□□ -0.57
NDUFA6P56556 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.46□□□□□ -0.57
NDUFA6P56556 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NDUFA6P56556 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms