Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
FOXG1P55316 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.05□□□□□ -0.32
FOXG1P55316 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
FOXG1P55316 BTBD6P1-201ENST00000412176 1267 ntBASIC13.05□□□□□ -0.32
FOXG1P55316 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.05□□□□□ -0.32
FOXG1P55316 HSPB1P2-201ENST00000448722 546 ntBASIC13.05□□□□□ -0.32
FOXG1P55316 AL591846.1-201ENST00000451736 433 ntBASIC13.05□□□□□ -0.32
FOXG1P55316 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
FOXG1P55316 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.05□□□□□ -0.32
FOXG1P55316 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.05□□□□□ -0.32
FOXG1P55316 AC005730.2-201ENST00000564549 1184 ntBASIC13.05□□□□□ -0.32
FOXG1P55316 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.05□□□□□ -0.32
FOXG1P55316 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.05□□□□□ -0.32
FOXG1P55316 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.05□□□□□ -0.32
FOXG1P55316 AC244157.2-201ENST00000616239 1006 ntBASIC13.05□□□□□ -0.32
FOXG1P55316 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.05□□□□□ -0.32
FOXG1P55316 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.05□□□□□ -0.32
FOXG1P55316 AL136172.1-201ENST00000598590 1394 ntBASIC13.05□□□□□ -0.32
FOXG1P55316 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
FOXG1P55316 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.05□□□□□ -0.32
FOXG1P55316 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.04□□□□□ -0.32
FOXG1P55316 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.04□□□□□ -0.32
FOXG1P55316 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
FOXG1P55316 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.04□□□□□ -0.32
FOXG1P55316 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.04□□□□□ -0.32
FOXG1P55316 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
FOXG1P55316 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
FOXG1P55316 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.04□□□□□ -0.32
FOXG1P55316 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
FOXG1P55316 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.04□□□□□ -0.32
FOXG1P55316 AC079178.1-201ENST00000420915 656 ntBASIC13.04□□□□□ -0.32
FOXG1P55316 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.04□□□□□ -0.32
FOXG1P55316 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.04□□□□□ -0.32
FOXG1P55316 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.04□□□□□ -0.32
FOXG1P55316 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.04□□□□□ -0.32
FOXG1P55316 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.04□□□□□ -0.32
FOXG1P55316 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.04□□□□□ -0.32
FOXG1P55316 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.04□□□□□ -0.32
FOXG1P55316 MIR6799-201ENST00000620297 69 ntBASIC13.04□□□□□ -0.32
FOXG1P55316 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
FOXG1P55316 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
FOXG1P55316 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.04□□□□□ -0.32
FOXG1P55316 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
FOXG1P55316 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
FOXG1P55316 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
FOXG1P55316 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
FOXG1P55316 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
FOXG1P55316 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
FOXG1P55316 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
FOXG1P55316 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
FOXG1P55316 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.03□□□□□ -0.32
FOXG1P55316 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.03□□□□□ -0.32
FOXG1P55316 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.03□□□□□ -0.32
FOXG1P55316 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.03□□□□□ -0.32
FOXG1P55316 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.03□□□□□ -0.32
FOXG1P55316 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
FOXG1P55316 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms