Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDH4P55283 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH4P55283 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CDH4P55283 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH4P55283 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CDH4P55283 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CDH4P55283 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH4P55283 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH4P55283 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH4P55283 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH4P55283 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CDH4P55283 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CDH4P55283 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.2■□□□□ 0.02
CDH4P55283 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDH4P55283 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH4P55283 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH4P55283 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.2■□□□□ 0.02
CDH4P55283 POM121L10P-201ENST00000436994 1285 ntBASIC15.2■□□□□ 0.02
CDH4P55283 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 AL035414.1-201ENST00000451327 857 ntBASIC15.2■□□□□ 0.02
CDH4P55283 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.2■□□□□ 0.02
CDH4P55283 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CDH4P55283 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.2■□□□□ 0.02
CDH4P55283 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.2■□□□□ 0.02
CDH4P55283 AC009955.4-201ENST00000597192 544 ntBASIC15.2■□□□□ 0.02
CDH4P55283 MIR6869-201ENST00000619434 62 ntBASIC15.2■□□□□ 0.02
CDH4P55283 AC027601.3-201ENST00000622907 509 ntBASIC15.2■□□□□ 0.02
CDH4P55283 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.2■□□□□ 0.02
CDH4P55283 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CDH4P55283 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CDH4P55283 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH4P55283 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH4P55283 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH4P55283 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CDH4P55283 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH4P55283 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH4P55283 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH4P55283 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH4P55283 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CDH4P55283 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH4P55283 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH4P55283 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.19■□□□□ 0.02
CDH4P55283 E2F3P2-201ENST00000447755 1422 ntBASIC15.19■□□□□ 0.02
CDH4P55283 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CDH4P55283 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH4P55283 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
CDH4P55283 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH4P55283 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH4P55283 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH4P55283 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH4P55283 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH4P55283 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.19■□□□□ 0.02
CDH4P55283 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CDH4P55283 CICP12-201ENST00000455801 843 ntBASIC15.19■□□□□ 0.02
CDH4P55283 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.19■□□□□ 0.02
CDH4P55283 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH4P55283 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CDH4P55283 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CDH4P55283 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH4P55283 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.19■□□□□ 0.02
CDH4P55283 MIR4538-201ENST00000581377 78 ntBASIC15.19■□□□□ 0.02
CDH4P55283 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH4P55283 AC132192.2-201ENST00000596206 1147 ntBASIC15.19■□□□□ 0.02
CDH4P55283 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.19■□□□□ 0.02
CDH4P55283 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.19■□□□□ 0.02
CDH4P55283 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.19■□□□□ 0.02
CDH4P55283 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.19■□□□□ 0.02
CDH4P55283 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH4P55283 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH4P55283 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH4P55283 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH4P55283 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH4P55283 AC023824.1-201ENST00000562945 2975 ntBASIC15.19■□□□□ 0.02
CDH4P55283 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH4P55283 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH4P55283 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH4P55283 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH4P55283 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.19■□□□□ 0.02
CDH4P55283 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH4P55283 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDH4P55283 AP002414.2-201ENST00000591780 3365 ntBASIC15.19■□□□□ 0.02
CDH4P55283 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms