Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 AL138725.1-201ENST00000407347 1314 ntBASIC10.93□□□□□ -0.66
APOC4P55056 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC10.93□□□□□ -0.66
APOC4P55056 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC10.93□□□□□ -0.66
APOC4P55056 CSH2-202ENST00000345366 598 ntTSL 5 BASIC10.93□□□□□ -0.66
APOC4P55056 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 HNRNPA1P32-201ENST00000396326 963 ntBASIC10.93□□□□□ -0.66
APOC4P55056 AL354877.1-201ENST00000424412 413 ntBASIC10.93□□□□□ -0.66
APOC4P55056 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
APOC4P55056 HNRNPA1P63-201ENST00000427917 963 ntBASIC10.93□□□□□ -0.66
APOC4P55056 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC10.93□□□□□ -0.66
APOC4P55056 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC10.93□□□□□ -0.66
APOC4P55056 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC10.93□□□□□ -0.66
APOC4P55056 TUBB8P8-201ENST00000458717 1058 ntBASIC10.93□□□□□ -0.66
APOC4P55056 AC091804.1-201ENST00000486888 567 ntBASIC10.93□□□□□ -0.66
APOC4P55056 AC126915.1-201ENST00000522847 1038 ntBASIC10.93□□□□□ -0.66
APOC4P55056 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC10.93□□□□□ -0.66
APOC4P55056 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC10.93□□□□□ -0.66
APOC4P55056 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC10.93□□□□□ -0.66
APOC4P55056 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 AC100827.2-201ENST00000563214 1194 ntBASIC10.93□□□□□ -0.66
APOC4P55056 AC244093.1-201ENST00000610837 814 ntBASIC10.93□□□□□ -0.66
APOC4P55056 AL136295.7-201ENST00000619226 1200 ntBASIC10.93□□□□□ -0.66
APOC4P55056 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC10.93□□□□□ -0.66
APOC4P55056 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC10.93□□□□□ -0.66
APOC4P55056 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC10.93□□□□□ -0.66
APOC4P55056 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
APOC4P55056 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC10.93□□□□□ -0.66
APOC4P55056 AC011840.2-201ENST00000563063 1520 ntBASIC10.93□□□□□ -0.66
APOC4P55056 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC10.93□□□□□ -0.66
APOC4P55056 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOC4P55056 HARS-202ENST00000415192 1401 ntTSL 2 BASIC10.92□□□□□ -0.66
APOC4P55056 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 AC022532.1-201ENST00000624563 1728 ntBASIC10.92□□□□□ -0.66
APOC4P55056 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
APOC4P55056 KRT8P29-201ENST00000420409 1371 ntBASIC10.92□□□□□ -0.66
APOC4P55056 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC10.92□□□□□ -0.66
APOC4P55056 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC10.92□□□□□ -0.66
APOC4P55056 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 AGK-211ENST00000629555 2765 ntTSL 5 BASIC10.92□□□□□ -0.66
APOC4P55056 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
APOC4P55056 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC10.92□□□□□ -0.66
APOC4P55056 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC10.92□□□□□ -0.66
APOC4P55056 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 RBM38-204ENST00000371219 760 ntTSL 2 BASIC10.92□□□□□ -0.66
APOC4P55056 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
APOC4P55056 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
APOC4P55056 MIR1247-201ENST00000408206 136 ntBASIC10.92□□□□□ -0.66
APOC4P55056 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 GPAA1P2-201ENST00000417923 928 ntBASIC10.92□□□□□ -0.66
APOC4P55056 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC10.92□□□□□ -0.66
APOC4P55056 AL035414.1-201ENST00000451327 857 ntBASIC10.92□□□□□ -0.66
APOC4P55056 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC10.92□□□□□ -0.66
APOC4P55056 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC10.92□□□□□ -0.66
APOC4P55056 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOC4P55056 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms