Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.4■□□□□ 0.22
PMS1P54277 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PMS1P54277 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.4■□□□□ 0.22
PMS1P54277 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.4■□□□□ 0.22
PMS1P54277 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 AC016397.2-201ENST00000624848 1985 ntBASIC16.4■□□□□ 0.22
PMS1P54277 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.4■□□□□ 0.22
PMS1P54277 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 AC134312.5-201ENST00000568031 1313 ntBASIC16.4■□□□□ 0.22
PMS1P54277 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PMS1P54277 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PMS1P54277 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PMS1P54277 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.4■□□□□ 0.22
PMS1P54277 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.4■□□□□ 0.22
PMS1P54277 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.4■□□□□ 0.22
PMS1P54277 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PMS1P54277 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.39■□□□□ 0.22
PMS1P54277 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.39■□□□□ 0.22
PMS1P54277 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PMS1P54277 AC009093.2-202ENST00000620513 2079 ntBASIC16.39■□□□□ 0.21
PMS1P54277 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PMS1P54277 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMS1P54277 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.39■□□□□ 0.21
PMS1P54277 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PMS1P54277 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMS1P54277 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.39■□□□□ 0.21
PMS1P54277 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.39■□□□□ 0.21
PMS1P54277 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PMS1P54277 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMS1P54277 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.39■□□□□ 0.21
PMS1P54277 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMS1P54277 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMS1P54277 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PMS1P54277 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.39■□□□□ 0.21
PMS1P54277 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMS1P54277 BAATP1-201ENST00000412284 1225 ntBASIC16.39■□□□□ 0.21
PMS1P54277 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PMS1P54277 ACTG1P3-201ENST00000431775 1114 ntBASIC16.39■□□□□ 0.21
PMS1P54277 CRB3P1-201ENST00000449338 276 ntBASIC16.39■□□□□ 0.21
PMS1P54277 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.39■□□□□ 0.21
PMS1P54277 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.39■□□□□ 0.21
PMS1P54277 AL391280.1-201ENST00000506969 1062 ntBASIC16.39■□□□□ 0.21
PMS1P54277 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.39■□□□□ 0.21
PMS1P54277 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.39■□□□□ 0.21
PMS1P54277 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.39■□□□□ 0.21
PMS1P54277 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.39■□□□□ 0.21
PMS1P54277 AC009486.1-201ENST00000569860 813 ntBASIC16.39■□□□□ 0.21
PMS1P54277 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PMS1P54277 AC215219.1-201ENST00000400706 1817 ntBASIC16.39■□□□□ 0.21
PMS1P54277 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PMS1P54277 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMS1P54277 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMS1P54277 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMS1P54277 MRPL37P1-201ENST00000592451 1337 ntBASIC16.39■□□□□ 0.21
PMS1P54277 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PMS1P54277 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PMS1P54277 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PMS1P54277 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.39■□□□□ 0.21
PMS1P54277 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.39■□□□□ 0.21
PMS1P54277 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PMS1P54277 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMS1P54277 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMS1P54277 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PMS1P54277 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.38■□□□□ 0.21
PMS1P54277 RN7SL832P-201ENST00000607781 1756 ntBASIC16.38■□□□□ 0.21
PMS1P54277 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 AC011498.7-201ENST00000624986 2027 ntBASIC16.38■□□□□ 0.21
PMS1P54277 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PMS1P54277 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
PMS1P54277 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.38■□□□□ 0.21
PMS1P54277 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 AC245100.3-201ENST00000441281 285 ntBASIC16.38■□□□□ 0.21
PMS1P54277 MESTP3-201ENST00000503460 968 ntBASIC16.38■□□□□ 0.21
PMS1P54277 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PMS1P54277 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.38■□□□□ 0.21
PMS1P54277 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.38■□□□□ 0.21
PMS1P54277 GNRHR2-203ENST00000581100 1187 ntBASIC16.38■□□□□ 0.21
PMS1P54277 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.38■□□□□ 0.21
PMS1P54277 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.38■□□□□ 0.21
PMS1P54277 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.38■□□□□ 0.21
PMS1P54277 AC010319.3-201ENST00000597028 470 ntBASIC16.38■□□□□ 0.21
PMS1P54277 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms