Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.5□□□□□ -0.09
PDX1P52945 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PDX1P52945 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.5□□□□□ -0.09
PDX1P52945 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PDX1P52945 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.5□□□□□ -0.09
PDX1P52945 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
PDX1P52945 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.5□□□□□ -0.09
PDX1P52945 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PDX1P52945 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
PDX1P52945 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.5□□□□□ -0.09
PDX1P52945 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.5□□□□□ -0.09
PDX1P52945 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.5□□□□□ -0.09
PDX1P52945 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.5□□□□□ -0.09
PDX1P52945 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.5□□□□□ -0.09
PDX1P52945 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
PDX1P52945 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.5□□□□□ -0.09
PDX1P52945 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.5□□□□□ -0.09
PDX1P52945 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PDX1P52945 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.5□□□□□ -0.09
PDX1P52945 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
PDX1P52945 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PDX1P52945 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PDX1P52945 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
PDX1P52945 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.49□□□□□ -0.09
PDX1P52945 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
PDX1P52945 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.49□□□□□ -0.09
PDX1P52945 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PDX1P52945 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PDX1P52945 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.49□□□□□ -0.09
PDX1P52945 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.49□□□□□ -0.09
PDX1P52945 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.49□□□□□ -0.09
PDX1P52945 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.49□□□□□ -0.09
PDX1P52945 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.49□□□□□ -0.09
PDX1P52945 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.49□□□□□ -0.09
PDX1P52945 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.49□□□□□ -0.09
PDX1P52945 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.49□□□□□ -0.09
PDX1P52945 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
PDX1P52945 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PDX1P52945 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PDX1P52945 REXO1L5P-201ENST00000622260 2098 ntBASIC14.49□□□□□ -0.09
PDX1P52945 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.49□□□□□ -0.09
PDX1P52945 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.49□□□□□ -0.09
PDX1P52945 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.49□□□□□ -0.09
PDX1P52945 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.49□□□□□ -0.09
PDX1P52945 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PDX1P52945 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.48□□□□□ -0.09
PDX1P52945 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.48□□□□□ -0.09
PDX1P52945 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PDX1P52945 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms