Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.25□□□□□ -0.45
CEACAM3P40198 USP32P1-208ENST00000506594 1164 ntBASIC12.25□□□□□ -0.45
CEACAM3P40198 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.25□□□□□ -0.45
CEACAM3P40198 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.25□□□□□ -0.45
CEACAM3P40198 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.25□□□□□ -0.45
CEACAM3P40198 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.25□□□□□ -0.45
CEACAM3P40198 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.25□□□□□ -0.45
CEACAM3P40198 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.25□□□□□ -0.45
CEACAM3P40198 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.25□□□□□ -0.45
CEACAM3P40198 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 AP002414.2-201ENST00000591780 3365 ntBASIC12.25□□□□□ -0.45
CEACAM3P40198 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CEACAM3P40198 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.25□□□□□ -0.45
CEACAM3P40198 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CEACAM3P40198 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CEACAM3P40198 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CEACAM3P40198 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CEACAM3P40198 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.24□□□□□ -0.45
CEACAM3P40198 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.24□□□□□ -0.45
CEACAM3P40198 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.24□□□□□ -0.45
CEACAM3P40198 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CEACAM3P40198 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CEACAM3P40198 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.24□□□□□ -0.45
CEACAM3P40198 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CEACAM3P40198 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 TLE1P1-201ENST00000422965 589 ntBASIC12.24□□□□□ -0.45
CEACAM3P40198 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.24□□□□□ -0.45
CEACAM3P40198 EIF3FP3-201ENST00000434851 1086 ntBASIC12.24□□□□□ -0.45
CEACAM3P40198 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.24□□□□□ -0.45
CEACAM3P40198 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.24□□□□□ -0.45
CEACAM3P40198 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CEACAM3P40198 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.24□□□□□ -0.45
CEACAM3P40198 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.24□□□□□ -0.45
CEACAM3P40198 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.24□□□□□ -0.45
CEACAM3P40198 AC025279.2-201ENST00000569730 653 ntBASIC12.24□□□□□ -0.45
CEACAM3P40198 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CEACAM3P40198 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CEACAM3P40198 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.24□□□□□ -0.45
CEACAM3P40198 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CEACAM3P40198 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.24□□□□□ -0.45
CEACAM3P40198 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.24□□□□□ -0.45
CEACAM3P40198 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.24□□□□□ -0.45
CEACAM3P40198 AL162274.1-201ENST00000617191 1098 ntBASIC12.24□□□□□ -0.45
CEACAM3P40198 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 ENPP7P14-201ENST00000621765 1040 ntBASIC12.24□□□□□ -0.45
CEACAM3P40198 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
CEACAM3P40198 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
CEACAM3P40198 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CEACAM3P40198 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CEACAM3P40198 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CEACAM3P40198 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CEACAM3P40198 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CEACAM3P40198 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.23□□□□□ -0.45
CEACAM3P40198 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CEACAM3P40198 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CEACAM3P40198 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CEACAM3P40198 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CEACAM3P40198 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CEACAM3P40198 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CEACAM3P40198 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
CEACAM3P40198 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CEACAM3P40198 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CEACAM3P40198 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CEACAM3P40198 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CEACAM3P40198 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.23□□□□□ -0.45
CEACAM3P40198 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CEACAM3P40198 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.23□□□□□ -0.45
CEACAM3P40198 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.23□□□□□ -0.45
CEACAM3P40198 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CEACAM3P40198 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CEACAM3P40198 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.23□□□□□ -0.45
CEACAM3P40198 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.23□□□□□ -0.45
CEACAM3P40198 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CEACAM3P40198 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms