Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CTNNA1P35221 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.83■□□□□ 0.12
CTNNA1P35221 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.83■□□□□ 0.12
CTNNA1P35221 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CTNNA1P35221 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.83■□□□□ 0.12
CTNNA1P35221 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.83■□□□□ 0.12
CTNNA1P35221 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.83■□□□□ 0.12
CTNNA1P35221 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.83■□□□□ 0.12
CTNNA1P35221 AC022447.6-201ENST00000515522 438 ntBASIC15.83■□□□□ 0.12
CTNNA1P35221 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.83■□□□□ 0.12
CTNNA1P35221 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.83■□□□□ 0.12
CTNNA1P35221 AC104794.3-201ENST00000566840 1248 ntBASIC15.83■□□□□ 0.12
CTNNA1P35221 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.83■□□□□ 0.12
CTNNA1P35221 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.83■□□□□ 0.12
CTNNA1P35221 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.83■□□□□ 0.12
CTNNA1P35221 AC011474.4-201ENST00000623523 2076 ntBASIC15.83■□□□□ 0.12
CTNNA1P35221 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CTNNA1P35221 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CTNNA1P35221 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.83■□□□□ 0.12
CTNNA1P35221 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.83■□□□□ 0.12
CTNNA1P35221 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTNNA1P35221 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CTNNA1P35221 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.82■□□□□ 0.12
CTNNA1P35221 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
CTNNA1P35221 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.82■□□□□ 0.12
CTNNA1P35221 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.82■□□□□ 0.12
CTNNA1P35221 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CTNNA1P35221 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.82■□□□□ 0.12
CTNNA1P35221 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.82■□□□□ 0.12
CTNNA1P35221 AC055876.3-201ENST00000431496 288 ntBASIC15.82■□□□□ 0.12
CTNNA1P35221 VDAC1P7-201ENST00000462417 847 ntBASIC15.82■□□□□ 0.12
CTNNA1P35221 RN7SL399P-201ENST00000471648 279 ntBASIC15.82■□□□□ 0.12
CTNNA1P35221 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.82■□□□□ 0.12
CTNNA1P35221 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.82■□□□□ 0.12
CTNNA1P35221 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.82■□□□□ 0.12
CTNNA1P35221 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CTNNA1P35221 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.82■□□□□ 0.12
CTNNA1P35221 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.82■□□□□ 0.12
CTNNA1P35221 AC138649.4-201ENST00000612222 287 ntBASIC15.82■□□□□ 0.12
CTNNA1P35221 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.82■□□□□ 0.12
CTNNA1P35221 PRSS30P-206ENST00000641773 873 ntBASIC15.82■□□□□ 0.12
CTNNA1P35221 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CTNNA1P35221 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CTNNA1P35221 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CTNNA1P35221 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.82■□□□□ 0.12
CTNNA1P35221 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.82■□□□□ 0.12
CTNNA1P35221 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.82■□□□□ 0.12
CTNNA1P35221 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.82■□□□□ 0.12
CTNNA1P35221 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.82■□□□□ 0.12
CTNNA1P35221 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.82■□□□□ 0.12
CTNNA1P35221 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.82■□□□□ 0.12
CTNNA1P35221 MST1P2-201ENST00000457982 2291 ntBASIC15.82■□□□□ 0.12
CTNNA1P35221 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTNNA1P35221 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTNNA1P35221 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTNNA1P35221 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CTNNA1P35221 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTNNA1P35221 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTNNA1P35221 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTNNA1P35221 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms