Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.34□□□□□ -0.11
CCKBRP32239 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.34□□□□□ -0.11
CCKBRP32239 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.34□□□□□ -0.11
CCKBRP32239 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.34□□□□□ -0.11
CCKBRP32239 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.34□□□□□ -0.11
CCKBRP32239 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCKBRP32239 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.34□□□□□ -0.11
CCKBRP32239 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.34□□□□□ -0.11
CCKBRP32239 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.34□□□□□ -0.11
CCKBRP32239 FGFR3P5-201ENST00000564496 886 ntBASIC14.34□□□□□ -0.11
CCKBRP32239 DUX4L46-201ENST00000566845 751 ntBASIC14.34□□□□□ -0.11
CCKBRP32239 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCKBRP32239 MIR4783-201ENST00000580343 82 ntBASIC14.34□□□□□ -0.11
CCKBRP32239 RN7SL574P-201ENST00000581512 297 ntBASIC14.34□□□□□ -0.11
CCKBRP32239 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.34□□□□□ -0.11
CCKBRP32239 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.34□□□□□ -0.11
CCKBRP32239 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
CCKBRP32239 AC128714.1-201ENST00000637035 887 ntBASIC14.34□□□□□ -0.11
CCKBRP32239 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCKBRP32239 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.34□□□□□ -0.11
CCKBRP32239 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCKBRP32239 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
CCKBRP32239 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.34□□□□□ -0.11
CCKBRP32239 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCKBRP32239 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.34□□□□□ -0.11
CCKBRP32239 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCKBRP32239 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCKBRP32239 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCKBRP32239 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.34□□□□□ -0.11
CCKBRP32239 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCKBRP32239 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCKBRP32239 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCKBRP32239 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCKBRP32239 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCKBRP32239 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.33□□□□□ -0.11
CCKBRP32239 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCKBRP32239 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.33□□□□□ -0.11
CCKBRP32239 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CCKBRP32239 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CCKBRP32239 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.33□□□□□ -0.11
CCKBRP32239 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCKBRP32239 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCKBRP32239 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.33□□□□□ -0.11
CCKBRP32239 AC012508.2-201ENST00000567613 1472 ntBASIC14.33□□□□□ -0.12
CCKBRP32239 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCKBRP32239 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCKBRP32239 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCKBRP32239 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCKBRP32239 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CCKBRP32239 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCKBRP32239 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCKBRP32239 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.33□□□□□ -0.12
CCKBRP32239 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.33□□□□□ -0.12
CCKBRP32239 FXNP2-201ENST00000411625 547 ntBASIC14.33□□□□□ -0.12
CCKBRP32239 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCKBRP32239 AC007274.2-201ENST00000421675 662 ntBASIC14.33□□□□□ -0.12
CCKBRP32239 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.33□□□□□ -0.12
CCKBRP32239 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.33□□□□□ -0.12
CCKBRP32239 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.33□□□□□ -0.12
CCKBRP32239 AC006335.1-201ENST00000445200 547 ntBASIC14.33□□□□□ -0.12
CCKBRP32239 PUDPP3-201ENST00000445368 636 ntBASIC14.33□□□□□ -0.12
CCKBRP32239 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.33□□□□□ -0.12
CCKBRP32239 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.33□□□□□ -0.12
CCKBRP32239 AC104073.2-201ENST00000453737 312 ntBASIC14.33□□□□□ -0.12
CCKBRP32239 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.33□□□□□ -0.12
CCKBRP32239 AC125604.1-201ENST00000496255 707 ntBASIC14.33□□□□□ -0.12
CCKBRP32239 NUP210P1-202ENST00000504322 710 ntBASIC14.33□□□□□ -0.12
CCKBRP32239 AC134698.3-201ENST00000523880 214 ntBASIC14.33□□□□□ -0.12
CCKBRP32239 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.33□□□□□ -0.12
CCKBRP32239 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CCKBRP32239 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.33□□□□□ -0.12
CCKBRP32239 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCKBRP32239 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.33□□□□□ -0.12
CCKBRP32239 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CCKBRP32239 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCKBRP32239 AC008825.2-201ENST00000603374 718 ntBASIC14.33□□□□□ -0.12
CCKBRP32239 AC090164.2-201ENST00000611487 516 ntBASIC14.33□□□□□ -0.12
CCKBRP32239 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.33□□□□□ -0.12
CCKBRP32239 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCKBRP32239 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.33□□□□□ -0.12
CCKBRP32239 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCKBRP32239 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.33□□□□□ -0.12
CCKBRP32239 MST1L-201ENST00000442552 2185 ntBASIC14.33□□□□□ -0.12
CCKBRP32239 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCKBRP32239 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCKBRP32239 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.33□□□□□ -0.12
CCKBRP32239 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.33□□□□□ -0.12
CCKBRP32239 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CCKBRP32239 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCKBRP32239 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCKBRP32239 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.32□□□□□ -0.12
CCKBRP32239 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CCKBRP32239 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCKBRP32239 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCKBRP32239 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCKBRP32239 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCKBRP32239 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCKBRP32239 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCKBRP32239 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCKBRP32239 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms