Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.32□□□□□ -0.28
HOXC12P31275 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.32□□□□□ -0.28
HOXC12P31275 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.32□□□□□ -0.28
HOXC12P31275 IGHJ2P-201ENST00000454480 60 ntBASIC13.32□□□□□ -0.28
HOXC12P31275 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.32□□□□□ -0.28
HOXC12P31275 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HOXC12P31275 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.32□□□□□ -0.28
HOXC12P31275 FAM86HP-204ENST00000513466 959 ntBASIC13.32□□□□□ -0.28
HOXC12P31275 KRT90P-201ENST00000549264 1064 ntBASIC13.32□□□□□ -0.28
HOXC12P31275 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HOXC12P31275 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.32□□□□□ -0.28
HOXC12P31275 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.32□□□□□ -0.28
HOXC12P31275 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HOXC12P31275 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HOXC12P31275 AC244669.2-201ENST00000612320 853 ntBASIC13.32□□□□□ -0.28
HOXC12P31275 PRSS30P-206ENST00000641773 873 ntBASIC13.32□□□□□ -0.28
HOXC12P31275 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HOXC12P31275 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.32□□□□□ -0.28
HOXC12P31275 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HOXC12P31275 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HOXC12P31275 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HOXC12P31275 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HOXC12P31275 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HOXC12P31275 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HOXC12P31275 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.32□□□□□ -0.28
HOXC12P31275 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HOXC12P31275 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HOXC12P31275 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HOXC12P31275 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
HOXC12P31275 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HOXC12P31275 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.31□□□□□ -0.28
HOXC12P31275 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.31□□□□□ -0.28
HOXC12P31275 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HOXC12P31275 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 AC112693.3-201ENST00000624819 1983 ntBASIC13.31□□□□□ -0.28
HOXC12P31275 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HOXC12P31275 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.31□□□□□ -0.28
HOXC12P31275 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 MIR326-201ENST00000362220 95 ntBASIC13.31□□□□□ -0.28
HOXC12P31275 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.31□□□□□ -0.28
HOXC12P31275 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HOXC12P31275 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.31□□□□□ -0.28
HOXC12P31275 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
HOXC12P31275 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HOXC12P31275 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.31□□□□□ -0.28
HOXC12P31275 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.31□□□□□ -0.28
HOXC12P31275 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.31□□□□□ -0.28
HOXC12P31275 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.31□□□□□ -0.28
HOXC12P31275 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.31□□□□□ -0.28
HOXC12P31275 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.31□□□□□ -0.28
HOXC12P31275 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.31□□□□□ -0.28
HOXC12P31275 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.31□□□□□ -0.28
HOXC12P31275 AC023310.1-201ENST00000554836 735 ntBASIC13.31□□□□□ -0.28
HOXC12P31275 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.31□□□□□ -0.28
HOXC12P31275 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.31□□□□□ -0.28
HOXC12P31275 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.31□□□□□ -0.28
HOXC12P31275 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.31□□□□□ -0.28
HOXC12P31275 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HOXC12P31275 AC138951.2-201ENST00000623455 1161 ntBASIC13.31□□□□□ -0.28
HOXC12P31275 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
HOXC12P31275 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.31□□□□□ -0.28
HOXC12P31275 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HOXC12P31275 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.31□□□□□ -0.28
HOXC12P31275 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.31□□□□□ -0.28
HOXC12P31275 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.31□□□□□ -0.28
HOXC12P31275 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.31□□□□□ -0.28
HOXC12P31275 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HOXC12P31275 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HOXC12P31275 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HOXC12P31275 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HOXC12P31275 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
HOXC12P31275 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HOXC12P31275 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms