Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PTPN4P29074 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.09■□□□□ 0.01
PTPN4P29074 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN4P29074 WASH4P-201ENST00000564273 1246 ntBASIC15.09■□□□□ 0.01
PTPN4P29074 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.09■□□□□ 0.01
PTPN4P29074 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.09■□□□□ 0.01
PTPN4P29074 AP000845.1-201ENST00000581677 2131 ntBASIC15.09■□□□□ 0.01
PTPN4P29074 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN4P29074 AC074044.1-201ENST00000609673 707 ntBASIC15.09■□□□□ 0.01
PTPN4P29074 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PTPN4P29074 MIR6752-201ENST00000618442 71 ntBASIC15.09■□□□□ 0.01
PTPN4P29074 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN4P29074 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.09■□□□□ 0.01
PTPN4P29074 CYP4F24P-201ENST00000586049 1580 ntBASIC15.09■□□□□ 0.01
PTPN4P29074 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN4P29074 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN4P29074 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN4P29074 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN4P29074 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN4P29074 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN4P29074 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PTPN4P29074 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN4P29074 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.09■□□□□ 0.01
PTPN4P29074 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PTPN4P29074 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PTPN4P29074 AL136982.4-201ENST00000437689 1740 ntBASIC15.09■□□□□ 0.01
PTPN4P29074 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.09■□□□□ 0.01
PTPN4P29074 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTPN4P29074 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PTPN4P29074 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PTPN4P29074 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.08■□□□□ 0.01
PTPN4P29074 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN4P29074 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN4P29074 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN4P29074 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN4P29074 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN4P29074 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PTPN4P29074 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN4P29074 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.08■□□□□ 0
PTPN4P29074 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.08■□□□□ 0
PTPN4P29074 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.08■□□□□ 0
PTPN4P29074 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.08■□□□□ 0
PTPN4P29074 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.08■□□□□ 0
PTPN4P29074 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.08■□□□□ 0
PTPN4P29074 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.08■□□□□ 0
PTPN4P29074 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.08■□□□□ 0
PTPN4P29074 AC092337.1-201ENST00000568699 1129 ntBASIC15.08■□□□□ 0
PTPN4P29074 AC132938.2-201ENST00000579188 680 ntBASIC15.08■□□□□ 0
PTPN4P29074 AL591163.1-201ENST00000641757 987 ntBASIC15.08■□□□□ 0
PTPN4P29074 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.08■□□□□ 0
PTPN4P29074 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.08■□□□□ 0
PTPN4P29074 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN4P29074 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PTPN4P29074 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
PTPN4P29074 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN4P29074 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
PTPN4P29074 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.08■□□□□ 0
PTPN4P29074 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PTPN4P29074 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.08■□□□□ 0
PTPN4P29074 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN4P29074 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.08■□□□□ 0
PTPN4P29074 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN4P29074 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PTPN4P29074 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.08■□□□□ 0
PTPN4P29074 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.08■□□□□ 0
PTPN4P29074 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PTPN4P29074 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.08■□□□□ 0
PTPN4P29074 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
PTPN4P29074 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN4P29074 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN4P29074 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN4P29074 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.07■□□□□ 0
PTPN4P29074 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PTPN4P29074 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTPN4P29074 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN4P29074 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN4P29074 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN4P29074 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN4P29074 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTPN4P29074 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN4P29074 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN4P29074 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.07■□□□□ 0
PTPN4P29074 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN4P29074 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
PTPN4P29074 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.07■□□□□ 0
PTPN4P29074 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.07■□□□□ 0
PTPN4P29074 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.07■□□□□ 0
PTPN4P29074 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.07■□□□□ 0
PTPN4P29074 AL589987.1-201ENST00000453380 819 ntBASIC15.07■□□□□ 0
PTPN4P29074 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN4P29074 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.07■□□□□ 0
PTPN4P29074 IGHV3-71-201ENST00000523324 359 ntBASIC15.07■□□□□ 0
PTPN4P29074 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN4P29074 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
PTPN4P29074 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.07■□□□□ 0
PTPN4P29074 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.07■□□□□ 0
PTPN4P29074 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PTPN4P29074 AC123567.1-201ENST00000548294 1261 ntBASIC15.07■□□□□ 0
PTPN4P29074 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
PTPN4P29074 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms