Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.35□□□□□ -0.11
PTX3P26022 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.35□□□□□ -0.11
PTX3P26022 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PTX3P26022 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.35□□□□□ -0.11
PTX3P26022 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 BX640514.1-201ENST00000583223 1918 ntBASIC14.35□□□□□ -0.11
PTX3P26022 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
PTX3P26022 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
PTX3P26022 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTX3P26022 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.34□□□□□ -0.11
PTX3P26022 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PTX3P26022 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.34□□□□□ -0.11
PTX3P26022 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.34□□□□□ -0.11
PTX3P26022 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.34□□□□□ -0.11
PTX3P26022 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PTX3P26022 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.34□□□□□ -0.11
PTX3P26022 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PTX3P26022 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.34□□□□□ -0.11
PTX3P26022 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.34□□□□□ -0.11
PTX3P26022 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
PTX3P26022 AC007389.4-201ENST00000454674 793 ntBASIC14.34□□□□□ -0.11
PTX3P26022 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.34□□□□□ -0.11
PTX3P26022 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.34□□□□□ -0.11
PTX3P26022 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 MSTO2P-201ENST00000314835 1709 ntBASIC14.34□□□□□ -0.11
PTX3P26022 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.34□□□□□ -0.11
PTX3P26022 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.34□□□□□ -0.11
PTX3P26022 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.34□□□□□ -0.11
PTX3P26022 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.34□□□□□ -0.11
PTX3P26022 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PTX3P26022 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
PTX3P26022 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.34□□□□□ -0.11
PTX3P26022 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PTX3P26022 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTX3P26022 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.33□□□□□ -0.11
PTX3P26022 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.33□□□□□ -0.11
PTX3P26022 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PTX3P26022 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
PTX3P26022 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
PTX3P26022 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PTX3P26022 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
PTX3P26022 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PTX3P26022 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PTX3P26022 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTX3P26022 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.33□□□□□ -0.12
PTX3P26022 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PTX3P26022 AC003102.2-201ENST00000589195 1469 ntBASIC14.33□□□□□ -0.12
PTX3P26022 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTX3P26022 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PTX3P26022 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTX3P26022 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTX3P26022 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTX3P26022 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PTX3P26022 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.33□□□□□ -0.12
PTX3P26022 AC245100.3-201ENST00000441281 285 ntBASIC14.33□□□□□ -0.12
PTX3P26022 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.33□□□□□ -0.12
PTX3P26022 TPT1P11-201ENST00000458482 498 ntBASIC14.33□□□□□ -0.12
PTX3P26022 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.33□□□□□ -0.12
PTX3P26022 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.33□□□□□ -0.12
PTX3P26022 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.33□□□□□ -0.12
PTX3P26022 RN7SL48P-201ENST00000579283 293 ntBASIC14.33□□□□□ -0.12
PTX3P26022 MIR3197-201ENST00000582241 73 ntBASIC14.33□□□□□ -0.12
PTX3P26022 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.33□□□□□ -0.12
PTX3P26022 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.33□□□□□ -0.12
PTX3P26022 AC132938.4-201ENST00000623835 848 ntBASIC14.33□□□□□ -0.12
PTX3P26022 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTX3P26022 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTX3P26022 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
PTX3P26022 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTX3P26022 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTX3P26022 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTX3P26022 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTX3P26022 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
PTX3P26022 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms