Protein–RNA interactions for Protein: P25105

PTAFR, Platelet-activating factor receptor, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTAFRP25105 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PTAFRP25105 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
PTAFRP25105 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
PTAFRP25105 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PTAFRP25105 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PTAFRP25105 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PTAFRP25105 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PTAFRP25105 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
PTAFRP25105 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.28□□□□□ -0.28
PTAFRP25105 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
PTAFRP25105 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PTAFRP25105 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.27□□□□□ -0.28
PTAFRP25105 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PTAFRP25105 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.27□□□□□ -0.28
PTAFRP25105 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PTAFRP25105 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PTAFRP25105 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PTAFRP25105 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PTAFRP25105 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PTAFRP25105 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PTAFRP25105 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PTAFRP25105 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
PTAFRP25105 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PTAFRP25105 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
PTAFRP25105 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PTAFRP25105 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PTAFRP25105 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PTAFRP25105 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
PTAFRP25105 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PTAFRP25105 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PTAFRP25105 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
PTAFRP25105 AL139094.1-201ENST00000405549 1188 ntBASIC13.27□□□□□ -0.29
PTAFRP25105 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PTAFRP25105 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.27□□□□□ -0.29
PTAFRP25105 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.27□□□□□ -0.29
PTAFRP25105 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.27□□□□□ -0.29
PTAFRP25105 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.27□□□□□ -0.29
PTAFRP25105 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.27□□□□□ -0.29
PTAFRP25105 KRT90P-201ENST00000549264 1064 ntBASIC13.27□□□□□ -0.29
PTAFRP25105 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PTAFRP25105 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.27□□□□□ -0.29
PTAFRP25105 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.27□□□□□ -0.29
PTAFRP25105 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PTAFRP25105 GNRHR2-203ENST00000581100 1187 ntBASIC13.27□□□□□ -0.29
PTAFRP25105 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.27□□□□□ -0.29
PTAFRP25105 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.27□□□□□ -0.29
PTAFRP25105 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.27□□□□□ -0.29
PTAFRP25105 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PTAFRP25105 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PTAFRP25105 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PTAFRP25105 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PTAFRP25105 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.27□□□□□ -0.29
PTAFRP25105 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
PTAFRP25105 LRRC59-203ENST00000576448 1531 ntBASIC13.27□□□□□ -0.29
PTAFRP25105 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
PTAFRP25105 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PTAFRP25105 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PTAFRP25105 AC105250.1-201ENST00000509378 2057 ntBASIC13.27□□□□□ -0.29
PTAFRP25105 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.27□□□□□ -0.29
PTAFRP25105 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PTAFRP25105 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PTAFRP25105 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.27□□□□□ -0.29
PTAFRP25105 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PTAFRP25105 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
PTAFRP25105 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PTAFRP25105 AC073869.1-201ENST00000415574 2762 ntBASIC13.26□□□□□ -0.29
PTAFRP25105 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
PTAFRP25105 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
PTAFRP25105 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PTAFRP25105 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PTAFRP25105 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PTAFRP25105 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
PTAFRP25105 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PTAFRP25105 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PTAFRP25105 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PTAFRP25105 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PTAFRP25105 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PTAFRP25105 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PTAFRP25105 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PTAFRP25105 RNU1-114P-201ENST00000365297 166 ntBASIC13.26□□□□□ -0.29
PTAFRP25105 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PTAFRP25105 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.26□□□□□ -0.29
PTAFRP25105 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
PTAFRP25105 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
PTAFRP25105 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.26□□□□□ -0.29
PTAFRP25105 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.26□□□□□ -0.29
PTAFRP25105 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
PTAFRP25105 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.26□□□□□ -0.29
PTAFRP25105 CNN2P8-201ENST00000421872 913 ntBASIC13.26□□□□□ -0.29
PTAFRP25105 HLA-V-201ENST00000429037 534 ntBASIC13.26□□□□□ -0.29
PTAFRP25105 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.26□□□□□ -0.29
PTAFRP25105 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PTAFRP25105 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.26□□□□□ -0.29
PTAFRP25105 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.26□□□□□ -0.29
PTAFRP25105 CSF2RBP1-201ENST00000447905 391 ntBASIC13.26□□□□□ -0.29
PTAFRP25105 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PTAFRP25105 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.26□□□□□ -0.29
PTAFRP25105 RNA5SP412-201ENST00000516234 123 ntBASIC13.26□□□□□ -0.29
PTAFRP25105 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.26□□□□□ -0.29
PTAFRP25105 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 464.3 ms