Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.03□□□□□ -0.16
CHMP24386 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.03□□□□□ -0.16
CHMP24386 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.03□□□□□ -0.16
CHMP24386 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CHMP24386 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CHMP24386 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.03□□□□□ -0.16
CHMP24386 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CHMP24386 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CHMP24386 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.03□□□□□ -0.16
CHMP24386 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CHMP24386 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHMP24386 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHMP24386 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
CHMP24386 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CHMP24386 AC010327.5-201ENST00000586923 3061 ntBASIC14.02□□□□□ -0.16
CHMP24386 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.02□□□□□ -0.16
CHMP24386 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHMP24386 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHMP24386 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CHMP24386 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHMP24386 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHMP24386 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHMP24386 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHMP24386 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CHMP24386 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHMP24386 AC092135.3-201ENST00000624151 1846 ntBASIC14.02□□□□□ -0.16
CHMP24386 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHMP24386 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CHMP24386 DRD5P1-201ENST00000456605 1438 ntBASIC14.02□□□□□ -0.16
CHMP24386 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CHMP24386 AC015802.1-201ENST00000588104 1449 ntBASIC14.02□□□□□ -0.16
CHMP24386 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHMP24386 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHMP24386 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHMP24386 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHMP24386 C1QBPP1-201ENST00000400117 770 ntBASIC14.02□□□□□ -0.17
CHMP24386 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.02□□□□□ -0.17
CHMP24386 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.02□□□□□ -0.17
CHMP24386 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
CHMP24386 AC007389.4-201ENST00000454674 793 ntBASIC14.02□□□□□ -0.17
CHMP24386 RN7SL837P-201ENST00000463010 287 ntBASIC14.02□□□□□ -0.17
CHMP24386 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.02□□□□□ -0.17
CHMP24386 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHMP24386 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.02□□□□□ -0.17
CHMP24386 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.02□□□□□ -0.17
CHMP24386 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.02□□□□□ -0.17
CHMP24386 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHMP24386 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.02□□□□□ -0.17
CHMP24386 AL359711.2-201ENST00000563105 872 ntBASIC14.02□□□□□ -0.17
CHMP24386 AC106886.1-201ENST00000568660 600 ntBASIC14.02□□□□□ -0.17
CHMP24386 AC124283.3-201ENST00000570869 594 ntBASIC14.02□□□□□ -0.17
CHMP24386 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
CHMP24386 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHMP24386 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHMP24386 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.02□□□□□ -0.17
CHMP24386 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.02□□□□□ -0.17
CHMP24386 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CHMP24386 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHMP24386 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHMP24386 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHMP24386 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.02□□□□□ -0.17
CHMP24386 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHMP24386 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHMP24386 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.02□□□□□ -0.17
CHMP24386 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHMP24386 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHMP24386 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.02□□□□□ -0.17
CHMP24386 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHMP24386 AC152010.1-201ENST00000415779 2006 ntBASIC14.02□□□□□ -0.17
CHMP24386 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CHMP24386 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.02□□□□□ -0.17
CHMP24386 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CHMP24386 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CHMP24386 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHMP24386 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHMP24386 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.01□□□□□ -0.17
CHMP24386 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.01□□□□□ -0.17
CHMP24386 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.01□□□□□ -0.17
CHMP24386 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CHMP24386 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHMP24386 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.01□□□□□ -0.17
CHMP24386 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CHMP24386 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHMP24386 AC007787.1-201ENST00000588095 1583 ntBASIC14.01□□□□□ -0.17
CHMP24386 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHMP24386 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CHMP24386 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.01□□□□□ -0.17
CHMP24386 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHMP24386 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.01□□□□□ -0.17
CHMP24386 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.01□□□□□ -0.17
CHMP24386 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHMP24386 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CHMP24386 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms