Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB3BP20337 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB3BP20337 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RAB3BP20337 SLC25A6P4-201ENST00000586535 553 ntBASIC13.15□□□□□ -0.3
RAB3BP20337 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB3BP20337 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB3BP20337 AF228730.6-201ENST00000641497 218 ntBASIC13.15□□□□□ -0.3
RAB3BP20337 AC084121.3-201ENST00000641716 218 ntBASIC13.15□□□□□ -0.3
RAB3BP20337 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RAB3BP20337 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB3BP20337 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB3BP20337 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB3BP20337 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB3BP20337 AL035456.1-201ENST00000456064 1369 ntBASIC13.15□□□□□ -0.3
RAB3BP20337 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB3BP20337 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB3BP20337 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RAB3BP20337 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB3BP20337 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB3BP20337 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB3BP20337 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RAB3BP20337 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB3BP20337 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB3BP20337 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB3BP20337 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RAB3BP20337 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
RAB3BP20337 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
RAB3BP20337 HLA-A-201ENST00000376802 1334 ntBASIC13.14□□□□□ -0.31
RAB3BP20337 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RAB3BP20337 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RAB3BP20337 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB3BP20337 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RAB3BP20337 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB3BP20337 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RAB3BP20337 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RAB3BP20337 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RAB3BP20337 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RAB3BP20337 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB3BP20337 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.14□□□□□ -0.31
RAB3BP20337 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RAB3BP20337 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RAB3BP20337 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.14□□□□□ -0.31
RAB3BP20337 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB3BP20337 MTND6P24-201ENST00000440466 518 ntBASIC13.14□□□□□ -0.31
RAB3BP20337 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.14□□□□□ -0.31
RAB3BP20337 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB3BP20337 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.14□□□□□ -0.31
RAB3BP20337 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB3BP20337 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB3BP20337 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RAB3BP20337 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB3BP20337 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB3BP20337 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RAB3BP20337 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB3BP20337 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RAB3BP20337 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RAB3BP20337 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.13□□□□□ -0.31
RAB3BP20337 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.13□□□□□ -0.31
RAB3BP20337 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RAB3BP20337 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.13□□□□□ -0.31
RAB3BP20337 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB3BP20337 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms