Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 EEF1DP1-201ENST00000585891 896 ntBASIC15.81■□□□□ 0.12
CCDC130P13994 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC130P13994 AC007292.2-201ENST00000593524 1812 ntBASIC15.81■□□□□ 0.12
CCDC130P13994 AL358472.3-201ENST00000608147 415 ntBASIC15.81■□□□□ 0.12
CCDC130P13994 AC002472.3-201ENST00000640124 621 ntBASIC15.81■□□□□ 0.12
CCDC130P13994 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC130P13994 MTHFR-210ENST00000641407 2387 ntBASIC15.81■□□□□ 0.12
CCDC130P13994 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CCDC130P13994 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC130P13994 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC130P13994 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC130P13994 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC130P13994 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC130P13994 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC130P13994 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 TUBB1P2-201ENST00000422712 1306 ntBASIC15.8■□□□□ 0.12
CCDC130P13994 TUBB1P1-201ENST00000503144 1300 ntBASIC15.8■□□□□ 0.12
CCDC130P13994 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC130P13994 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC130P13994 AC131206.1-201ENST00000538078 1211 ntBASIC15.8■□□□□ 0.12
CCDC130P13994 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC130P13994 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC130P13994 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC130P13994 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC130P13994 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.8■□□□□ 0.12
CCDC130P13994 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC130P13994 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC130P13994 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCDC130P13994 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCDC130P13994 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC130P13994 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC130P13994 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC130P13994 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.79■□□□□ 0.12
CCDC130P13994 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC130P13994 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
CCDC130P13994 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC130P13994 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC130P13994 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCDC130P13994 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC130P13994 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC130P13994 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC130P13994 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CCDC130P13994 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CCDC130P13994 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCDC130P13994 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CCDC130P13994 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC130P13994 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 MIR326-201ENST00000362220 95 ntBASIC15.79■□□□□ 0.12
CCDC130P13994 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC130P13994 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 MIR1908-201ENST00000410394 80 ntBASIC15.79■□□□□ 0.12
CCDC130P13994 Z93015.1-201ENST00000451718 390 ntBASIC15.79■□□□□ 0.12
CCDC130P13994 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC130P13994 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.79■□□□□ 0.12
CCDC130P13994 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC130P13994 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
CCDC130P13994 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.79■□□□□ 0.12
CCDC130P13994 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC130P13994 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CCDC130P13994 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC130P13994 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
CCDC130P13994 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC130P13994 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms