Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPRFP10586 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPRFP10586 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PTPRFP10586 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPRFP10586 AC117503.4-201ENST00000623229 1418 ntBASIC16.65■□□□□ 0.26
PTPRFP10586 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPRFP10586 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPRFP10586 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PTPRFP10586 NHP2-202ENST00000314397 599 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPRFP10586 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.65■□□□□ 0.26
PTPRFP10586 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.65■□□□□ 0.26
PTPRFP10586 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPRFP10586 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPRFP10586 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.65■□□□□ 0.26
PTPRFP10586 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPRFP10586 AL118516.1-201ENST00000564152 670 ntBASIC16.65■□□□□ 0.26
PTPRFP10586 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPRFP10586 FO393412.1-201ENST00000619841 382 ntBASIC16.65■□□□□ 0.26
PTPRFP10586 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.65■□□□□ 0.26
PTPRFP10586 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
PTPRFP10586 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPRFP10586 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPRFP10586 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPRFP10586 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PTPRFP10586 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PTPRFP10586 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.65■□□□□ 0.26
PTPRFP10586 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPRFP10586 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPRFP10586 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPRFP10586 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPRFP10586 AC019109.1-201ENST00000401725 1874 ntBASIC16.65■□□□□ 0.26
PTPRFP10586 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.65■□□□□ 0.26
PTPRFP10586 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PTPRFP10586 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PTPRFP10586 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PTPRFP10586 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PTPRFP10586 RN7SL564P-201ENST00000496309 250 ntBASIC16.64■□□□□ 0.26
PTPRFP10586 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.26
PTPRFP10586 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PTPRFP10586 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPRFP10586 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPRFP10586 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PTPRFP10586 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PTPRFP10586 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPRFP10586 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PTPRFP10586 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.64■□□□□ 0.25
PTPRFP10586 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPRFP10586 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPRFP10586 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPRFP10586 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
PTPRFP10586 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPRFP10586 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPRFP10586 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPRFP10586 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPRFP10586 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PTPRFP10586 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPRFP10586 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PTPRFP10586 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
PTPRFP10586 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPRFP10586 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
PTPRFP10586 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPRFP10586 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPRFP10586 AC018442.1-201ENST00000421439 2061 ntBASIC16.63■□□□□ 0.25
PTPRFP10586 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPRFP10586 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPRFP10586 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPRFP10586 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PTPRFP10586 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTPRFP10586 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPRFP10586 LINC00265-2P-201ENST00000413372 782 ntBASIC16.63■□□□□ 0.25
PTPRFP10586 AC098934.1-203ENST00000442868 1262 ntBASIC16.63■□□□□ 0.25
PTPRFP10586 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC16.63■□□□□ 0.25
PTPRFP10586 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPRFP10586 AC084752.1-201ENST00000509766 622 ntBASIC16.63■□□□□ 0.25
PTPRFP10586 OR5BD1P-201ENST00000532527 817 ntBASIC16.63■□□□□ 0.25
PTPRFP10586 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPRFP10586 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPRFP10586 PAUPAR-201ENST00000630360 2965 ntBASIC16.63■□□□□ 0.25
PTPRFP10586 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPRFP10586 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms