Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.77□□□□□ -0.21
THBS1P07996 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
THBS1P07996 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.77□□□□□ -0.21
THBS1P07996 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.77□□□□□ -0.21
THBS1P07996 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.77□□□□□ -0.21
THBS1P07996 ARSEP1-201ENST00000420443 635 ntBASIC13.77□□□□□ -0.21
THBS1P07996 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.77□□□□□ -0.21
THBS1P07996 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.77□□□□□ -0.21
THBS1P07996 AC093433.1-201ENST00000458048 571 ntBASIC13.77□□□□□ -0.21
THBS1P07996 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.77□□□□□ -0.21
THBS1P07996 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.77□□□□□ -0.21
THBS1P07996 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.77□□□□□ -0.21
THBS1P07996 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC13.77□□□□□ -0.21
THBS1P07996 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.77□□□□□ -0.21
THBS1P07996 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
THBS1P07996 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
THBS1P07996 AC027601.5-201ENST00000624065 2482 ntBASIC13.77□□□□□ -0.21
THBS1P07996 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.77□□□□□ -0.21
THBS1P07996 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
THBS1P07996 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.77□□□□□ -0.21
THBS1P07996 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
THBS1P07996 AC139749.1-202ENST00000617529 3139 ntBASIC13.77□□□□□ -0.21
THBS1P07996 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
THBS1P07996 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
THBS1P07996 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
THBS1P07996 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.76□□□□□ -0.21
THBS1P07996 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
THBS1P07996 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.76□□□□□ -0.21
THBS1P07996 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.76□□□□□ -0.21
THBS1P07996 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
THBS1P07996 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.76□□□□□ -0.21
THBS1P07996 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
THBS1P07996 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
THBS1P07996 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.76□□□□□ -0.21
THBS1P07996 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.76□□□□□ -0.21
THBS1P07996 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
THBS1P07996 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
THBS1P07996 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.76□□□□□ -0.21
THBS1P07996 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.76□□□□□ -0.21
THBS1P07996 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.76□□□□□ -0.21
THBS1P07996 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.76□□□□□ -0.21
THBS1P07996 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.76□□□□□ -0.21
THBS1P07996 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
THBS1P07996 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.76□□□□□ -0.21
THBS1P07996 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
THBS1P07996 AL033527.5-201ENST00000641382 801 ntBASIC13.76□□□□□ -0.21
THBS1P07996 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.76□□□□□ -0.21
THBS1P07996 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
THBS1P07996 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
THBS1P07996 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.76□□□□□ -0.21
THBS1P07996 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
THBS1P07996 AC015656.1-201ENST00000624209 3578 ntBASIC13.76□□□□□ -0.21
THBS1P07996 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
THBS1P07996 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
THBS1P07996 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
THBS1P07996 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.75□□□□□ -0.21
THBS1P07996 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms