Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.44□□□□□ -0.42
CTSDP07339 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.44□□□□□ -0.42
CTSDP07339 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CTSDP07339 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.44□□□□□ -0.42
CTSDP07339 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.44□□□□□ -0.42
CTSDP07339 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
CTSDP07339 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.44□□□□□ -0.42
CTSDP07339 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
CTSDP07339 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.44□□□□□ -0.42
CTSDP07339 CEND1P1-201ENST00000451006 455 ntBASIC12.44□□□□□ -0.42
CTSDP07339 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.44□□□□□ -0.42
CTSDP07339 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.44□□□□□ -0.42
CTSDP07339 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.44□□□□□ -0.42
CTSDP07339 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CTSDP07339 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.44□□□□□ -0.42
CTSDP07339 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.44□□□□□ -0.42
CTSDP07339 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.44□□□□□ -0.42
CTSDP07339 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.44□□□□□ -0.42
CTSDP07339 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.44□□□□□ -0.42
CTSDP07339 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CTSDP07339 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CTSDP07339 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CTSDP07339 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CTSDP07339 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.44□□□□□ -0.42
CTSDP07339 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CTSDP07339 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.44□□□□□ -0.42
CTSDP07339 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
CTSDP07339 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.43□□□□□ -0.42
CTSDP07339 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CTSDP07339 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 AC027612.1-201ENST00000445234 2395 ntBASIC12.43□□□□□ -0.42
CTSDP07339 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.43□□□□□ -0.42
CTSDP07339 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 MYADML-201ENST00000474610 2147 ntBASIC12.43□□□□□ -0.42
CTSDP07339 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CTSDP07339 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
CTSDP07339 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.43□□□□□ -0.42
CTSDP07339 AL627223.1-201ENST00000416693 442 ntBASIC12.43□□□□□ -0.42
CTSDP07339 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.43□□□□□ -0.42
CTSDP07339 UPF3AP3-201ENST00000420996 769 ntBASIC12.43□□□□□ -0.42
CTSDP07339 GPS2P2-201ENST00000430745 888 ntBASIC12.43□□□□□ -0.42
CTSDP07339 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CTSDP07339 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.43□□□□□ -0.42
CTSDP07339 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CTSDP07339 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.43□□□□□ -0.42
CTSDP07339 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.43□□□□□ -0.42
CTSDP07339 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.43□□□□□ -0.42
CTSDP07339 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.43□□□□□ -0.42
CTSDP07339 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.43□□□□□ -0.42
CTSDP07339 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.43□□□□□ -0.42
CTSDP07339 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.43□□□□□ -0.42
CTSDP07339 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.43□□□□□ -0.42
CTSDP07339 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.43□□□□□ -0.42
CTSDP07339 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CTSDP07339 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.43□□□□□ -0.42
CTSDP07339 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CTSDP07339 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms