Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
APOC1P02654 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.31□□□□□ -0.28
APOC1P02654 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 AC093525.8-201ENST00000624099 1342 ntBASIC13.31□□□□□ -0.28
APOC1P02654 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.31□□□□□ -0.28
APOC1P02654 AL138799.1-201ENST00000448213 1675 ntBASIC13.31□□□□□ -0.28
APOC1P02654 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOC1P02654 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.3□□□□□ -0.28
APOC1P02654 CLK3P2-201ENST00000427566 1453 ntBASIC13.3□□□□□ -0.28
APOC1P02654 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
APOC1P02654 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.3□□□□□ -0.28
APOC1P02654 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.3□□□□□ -0.28
APOC1P02654 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 AL353779.1-201ENST00000434793 351 ntBASIC13.3□□□□□ -0.28
APOC1P02654 AC093004.1-201ENST00000508850 424 ntBASIC13.3□□□□□ -0.28
APOC1P02654 DOC2GP-202ENST00000514950 1163 ntBASIC13.3□□□□□ -0.28
APOC1P02654 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.3□□□□□ -0.28
APOC1P02654 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.3□□□□□ -0.28
APOC1P02654 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.3□□□□□ -0.28
APOC1P02654 AL049840.4-201ENST00000602422 811 ntBASIC13.3□□□□□ -0.28
APOC1P02654 AC008738.7-201ENST00000609744 511 ntBASIC13.3□□□□□ -0.28
APOC1P02654 AC093512.1-201ENST00000617969 520 ntBASIC13.3□□□□□ -0.28
APOC1P02654 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.3□□□□□ -0.28
APOC1P02654 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
APOC1P02654 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.3□□□□□ -0.28
APOC1P02654 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
APOC1P02654 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.3□□□□□ -0.28
APOC1P02654 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.3□□□□□ -0.28
APOC1P02654 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
APOC1P02654 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
APOC1P02654 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.3□□□□□ -0.28
APOC1P02654 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOC1P02654 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
APOC1P02654 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.29□□□□□ -0.28
APOC1P02654 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
APOC1P02654 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC1P02654 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.29□□□□□ -0.28
APOC1P02654 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
APOC1P02654 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.29□□□□□ -0.28
APOC1P02654 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
APOC1P02654 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
APOC1P02654 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.29□□□□□ -0.28
APOC1P02654 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
APOC1P02654 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
APOC1P02654 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC1P02654 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC1P02654 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.29□□□□□ -0.28
APOC1P02654 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.29□□□□□ -0.28
APOC1P02654 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOC1P02654 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms