Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL049840.3-201ENST00000602669 611 ntBASIC11.3□□□□□ -0.6
HLA-DQA1P01909 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
HLA-DQA1P01909 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 AC073621.1-201ENST00000392730 636 ntBASIC11.29□□□□□ -0.6
HLA-DQA1P01909 METTL26-205ENST00000397666 726 ntTSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 AC136604.1-201ENST00000418535 575 ntBASIC11.29□□□□□ -0.6
HLA-DQA1P01909 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 AC009078.2-202ENST00000463353 338 ntBASIC11.29□□□□□ -0.6
HLA-DQA1P01909 AC108073.2-201ENST00000464002 357 ntBASIC11.29□□□□□ -0.6
HLA-DQA1P01909 AC108751.1-201ENST00000490852 363 ntBASIC11.29□□□□□ -0.6
HLA-DQA1P01909 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 LITAF-211ENST00000572255 516 ntTSL 4 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 AC061975.2-201ENST00000581722 295 ntBASIC11.29□□□□□ -0.6
HLA-DQA1P01909 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 AC008667.4-201ENST00000607370 168 ntBASIC11.29□□□□□ -0.6
HLA-DQA1P01909 ACTL9-202ENST00000612068 1252 ntBASIC11.29□□□□□ -0.6
HLA-DQA1P01909 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.29□□□□□ -0.6
HLA-DQA1P01909 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 AC111170.3-201ENST00000624282 2464 ntBASIC11.29□□□□□ -0.6
HLA-DQA1P01909 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HLA-DQA1P01909 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DQA1P01909 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.28□□□□□ -0.6
HLA-DQA1P01909 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.28□□□□□ -0.6
HLA-DQA1P01909 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HLA-DQA1P01909 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms