Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1AO95602 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1AO95602 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1AO95602 LINC00554-201ENST00000564841 3011 ntBASIC21.12■□□□□ 0.97
POLR1AO95602 HTR7P1-202ENST00000624664 4411 ntBASIC21.12■□□□□ 0.97
POLR1AO95602 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC21.12■□□□□ 0.97
POLR1AO95602 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1AO95602 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC21.12■□□□□ 0.97
POLR1AO95602 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC21.12■□□□□ 0.97
POLR1AO95602 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC21.12■□□□□ 0.97
POLR1AO95602 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC21.12■□□□□ 0.97
POLR1AO95602 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC21.12■□□□□ 0.97
POLR1AO95602 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1AO95602 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1AO95602 AC055811.3-201ENST00000584952 686 ntBASIC21.12■□□□□ 0.97
POLR1AO95602 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC21.12■□□□□ 0.97
POLR1AO95602 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1AO95602 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR1AO95602 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
POLR1AO95602 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC21.11■□□□□ 0.97
POLR1AO95602 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC21.11■□□□□ 0.97
POLR1AO95602 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
POLR1AO95602 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR1AO95602 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR1AO95602 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
POLR1AO95602 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR1AO95602 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
POLR1AO95602 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC21.11■□□□□ 0.97
POLR1AO95602 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
POLR1AO95602 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC21.11■□□□□ 0.97
POLR1AO95602 BRI3P1-201ENST00000440440 378 ntBASIC21.11■□□□□ 0.97
POLR1AO95602 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC21.11■□□□□ 0.97
POLR1AO95602 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC21.11■□□□□ 0.97
POLR1AO95602 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC21.11■□□□□ 0.97
POLR1AO95602 AC003102.2-201ENST00000589195 1469 ntBASIC21.11■□□□□ 0.97
POLR1AO95602 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC21.11■□□□□ 0.97
POLR1AO95602 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR1AO95602 AL139339.2-201ENST00000608063 657 ntBASIC21.11■□□□□ 0.97
POLR1AO95602 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC21.11■□□□□ 0.97
POLR1AO95602 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR1AO95602 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR1AO95602 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
POLR1AO95602 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC21.1■□□□□ 0.97
POLR1AO95602 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1AO95602 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1AO95602 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1AO95602 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1AO95602 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1AO95602 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC21.1■□□□□ 0.97
POLR1AO95602 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
POLR1AO95602 TLE1P1-201ENST00000422965 589 ntBASIC21.1■□□□□ 0.97
POLR1AO95602 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1AO95602 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC21.1■□□□□ 0.97
POLR1AO95602 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC21.1■□□□□ 0.97
POLR1AO95602 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1AO95602 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC21.1■□□□□ 0.97
POLR1AO95602 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1AO95602 AL627230.2-201ENST00000613254 655 ntBASIC21.1■□□□□ 0.97
POLR1AO95602 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
POLR1AO95602 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC21.1■□□□□ 0.97
POLR1AO95602 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
POLR1AO95602 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1AO95602 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
POLR1AO95602 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC21.1■□□□□ 0.97
POLR1AO95602 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC21.1■□□□□ 0.97
POLR1AO95602 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1AO95602 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1AO95602 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR1AO95602 AQP7P5-201ENST00000428759 1049 ntBASIC21.09■□□□□ 0.97
POLR1AO95602 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC21.09■□□□□ 0.97
POLR1AO95602 AQP7P4-201ENST00000447083 1042 ntBASIC21.09■□□□□ 0.97
POLR1AO95602 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC21.09■□□□□ 0.97
POLR1AO95602 AQP7P2-201ENST00000453967 1041 ntBASIC21.09■□□□□ 0.97
POLR1AO95602 AC026470.1-201ENST00000478038 846 ntBASIC21.09■□□□□ 0.97
POLR1AO95602 MIR6816-201ENST00000620368 66 ntBASIC21.09■□□□□ 0.97
POLR1AO95602 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC21.09■□□□□ 0.97
POLR1AO95602 AQP7P3-201ENST00000624547 1041 ntBASIC21.09■□□□□ 0.97
POLR1AO95602 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1AO95602 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1AO95602 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1AO95602 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1AO95602 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1AO95602 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC21.09■□□□□ 0.97
POLR1AO95602 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1AO95602 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
POLR1AO95602 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC21.09■□□□□ 0.97
POLR1AO95602 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1AO95602 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1AO95602 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
POLR1AO95602 SF1-209ENST00000433274 2317 ntTSL 2 BASIC21.09■□□□□ 0.97
POLR1AO95602 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC21.09■□□□□ 0.97
POLR1AO95602 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC21.09■□□□□ 0.97
POLR1AO95602 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
POLR1AO95602 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC21.09■□□□□ 0.97
POLR1AO95602 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1AO95602 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC21.09■□□□□ 0.97
POLR1AO95602 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1AO95602 SURF4-203ENST00000371991 715 ntTSL 3 BASIC21.09■□□□□ 0.97
POLR1AO95602 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR1AO95602 AL135901.1-201ENST00000451812 333 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms