Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.02□□□□□ -0.17
TRIM3O75382 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM3O75382 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM3O75382 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 AC007787.1-201ENST00000588095 1583 ntBASIC14.01□□□□□ -0.17
TRIM3O75382 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM3O75382 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRIM3O75382 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TRIM3O75382 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRIM3O75382 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM3O75382 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 AC092933.1-201ENST00000393644 945 ntBASIC14.01□□□□□ -0.17
TRIM3O75382 AL645937.2-201ENST00000396808 931 ntBASIC14.01□□□□□ -0.17
TRIM3O75382 AC104457.1-201ENST00000401024 814 ntBASIC14.01□□□□□ -0.17
TRIM3O75382 BOLA2P3-201ENST00000404566 256 ntBASIC14.01□□□□□ -0.17
TRIM3O75382 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 ATP5G2P4-201ENST00000442175 420 ntBASIC14.01□□□□□ -0.17
TRIM3O75382 AL355864.2-201ENST00000447420 863 ntBASIC14.01□□□□□ -0.17
TRIM3O75382 BCRP2-202ENST00000447763 634 ntBASIC14.01□□□□□ -0.17
TRIM3O75382 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRIM3O75382 BCRP6-201ENST00000510112 632 ntBASIC14.01□□□□□ -0.17
TRIM3O75382 BCRP7-201ENST00000511549 544 ntBASIC14.01□□□□□ -0.17
TRIM3O75382 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.01□□□□□ -0.17
TRIM3O75382 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM3O75382 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
TRIM3O75382 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 PRSS30P-206ENST00000641773 873 ntBASIC14.01□□□□□ -0.17
TRIM3O75382 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRIM3O75382 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.01□□□□□ -0.17
TRIM3O75382 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
TRIM3O75382 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRIM3O75382 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM3O75382 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRIM3O75382 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRIM3O75382 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM3O75382 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRIM3O75382 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14□□□□□ -0.17
TRIM3O75382 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
TRIM3O75382 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14□□□□□ -0.17
TRIM3O75382 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRIM3O75382 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14□□□□□ -0.17
TRIM3O75382 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRIM3O75382 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRIM3O75382 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14□□□□□ -0.17
TRIM3O75382 AC234783.1-201ENST00000441761 496 ntBASIC14□□□□□ -0.17
TRIM3O75382 CROCCP4-201ENST00000457096 498 ntBASIC14□□□□□ -0.17
TRIM3O75382 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14□□□□□ -0.17
TRIM3O75382 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14□□□□□ -0.17
TRIM3O75382 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRIM3O75382 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14□□□□□ -0.17
TRIM3O75382 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14□□□□□ -0.17
TRIM3O75382 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 APRT-204ENST00000563655 709 ntTSL 5 BASIC14□□□□□ -0.17
TRIM3O75382 AC017083.2-201ENST00000608069 979 ntBASIC14□□□□□ -0.17
TRIM3O75382 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRIM3O75382 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14□□□□□ -0.17
TRIM3O75382 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
TRIM3O75382 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms