Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNQ3O43525 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
KCNQ3O43525 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNQ3O43525 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNQ3O43525 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNQ3O43525 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNQ3O43525 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNQ3O43525 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.92■□□□□ 0.62
KCNQ3O43525 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNQ3O43525 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
KCNQ3O43525 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNQ3O43525 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNQ3O43525 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC18.92■□□□□ 0.62
KCNQ3O43525 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNQ3O43525 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC18.92■□□□□ 0.62
KCNQ3O43525 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.91■□□□□ 0.62
KCNQ3O43525 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
KCNQ3O43525 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
KCNQ3O43525 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNQ3O43525 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNQ3O43525 AC023157.3-201ENST00000619086 2088 ntBASIC18.91■□□□□ 0.62
KCNQ3O43525 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
KCNQ3O43525 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNQ3O43525 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
KCNQ3O43525 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KCNQ3O43525 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNQ3O43525 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.91■□□□□ 0.62
KCNQ3O43525 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNQ3O43525 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNQ3O43525 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC18.91■□□□□ 0.62
KCNQ3O43525 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC18.91■□□□□ 0.62
KCNQ3O43525 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.91■□□□□ 0.62
KCNQ3O43525 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC18.91■□□□□ 0.62
KCNQ3O43525 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.91■□□□□ 0.62
KCNQ3O43525 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.91■□□□□ 0.62
KCNQ3O43525 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.91■□□□□ 0.62
KCNQ3O43525 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.91■□□□□ 0.62
KCNQ3O43525 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
KCNQ3O43525 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC18.91■□□□□ 0.62
KCNQ3O43525 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.91■□□□□ 0.62
KCNQ3O43525 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.91■□□□□ 0.62
KCNQ3O43525 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
KCNQ3O43525 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNQ3O43525 AC006480.2-201ENST00000609770 1337 ntBASIC18.91■□□□□ 0.62
KCNQ3O43525 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNQ3O43525 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
KCNQ3O43525 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KCNQ3O43525 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
KCNQ3O43525 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNQ3O43525 CAP2P1-201ENST00000557743 1390 ntBASIC18.91■□□□□ 0.62
KCNQ3O43525 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KCNQ3O43525 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNQ3O43525 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
KCNQ3O43525 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC18.9■□□□□ 0.62
KCNQ3O43525 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
KCNQ3O43525 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
KCNQ3O43525 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
KCNQ3O43525 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.9■□□□□ 0.62
KCNQ3O43525 FGFR3P1-201ENST00000449999 601 ntBASIC18.9■□□□□ 0.62
KCNQ3O43525 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.9■□□□□ 0.62
KCNQ3O43525 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.9■□□□□ 0.62
KCNQ3O43525 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC18.9■□□□□ 0.62
KCNQ3O43525 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 MIR3147-201ENST00000577811 66 ntBASIC18.9■□□□□ 0.62
KCNQ3O43525 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.9■□□□□ 0.62
KCNQ3O43525 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.9■□□□□ 0.62
KCNQ3O43525 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
KCNQ3O43525 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.9■□□□□ 0.62
KCNQ3O43525 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.9■□□□□ 0.62
KCNQ3O43525 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
KCNQ3O43525 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
KCNQ3O43525 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNQ3O43525 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
KCNQ3O43525 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
KCNQ3O43525 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
KCNQ3O43525 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
KCNQ3O43525 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.89■□□□□ 0.61
KCNQ3O43525 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNQ3O43525 KHSRPP1-201ENST00000427983 1768 ntBASIC18.89■□□□□ 0.61
KCNQ3O43525 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNQ3O43525 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNQ3O43525 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNQ3O43525 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms