Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.59□□□□□ -0.07
E2F3O00716 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.59□□□□□ -0.07
E2F3O00716 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.59□□□□□ -0.07
E2F3O00716 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.59□□□□□ -0.07
E2F3O00716 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
E2F3O00716 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
E2F3O00716 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
E2F3O00716 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
E2F3O00716 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
E2F3O00716 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
E2F3O00716 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
E2F3O00716 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.59□□□□□ -0.07
E2F3O00716 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
E2F3O00716 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
E2F3O00716 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.59□□□□□ -0.07
E2F3O00716 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
E2F3O00716 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.59□□□□□ -0.07
E2F3O00716 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
E2F3O00716 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.59□□□□□ -0.07
E2F3O00716 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.59□□□□□ -0.07
E2F3O00716 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.59□□□□□ -0.07
E2F3O00716 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.59□□□□□ -0.07
E2F3O00716 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.59□□□□□ -0.07
E2F3O00716 MIR4259-201ENST00000584466 101 ntBASIC14.59□□□□□ -0.07
E2F3O00716 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.59□□□□□ -0.07
E2F3O00716 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.59□□□□□ -0.07
E2F3O00716 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
E2F3O00716 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
E2F3O00716 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
E2F3O00716 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.59□□□□□ -0.07
E2F3O00716 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
E2F3O00716 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
E2F3O00716 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.59□□□□□ -0.07
E2F3O00716 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.59□□□□□ -0.07
E2F3O00716 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
E2F3O00716 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
E2F3O00716 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.59□□□□□ -0.07
E2F3O00716 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.59□□□□□ -0.07
E2F3O00716 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.59□□□□□ -0.07
E2F3O00716 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.59□□□□□ -0.07
E2F3O00716 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.59□□□□□ -0.07
E2F3O00716 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
E2F3O00716 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
E2F3O00716 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
E2F3O00716 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.58□□□□□ -0.07
E2F3O00716 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
E2F3O00716 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
E2F3O00716 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.58□□□□□ -0.08
E2F3O00716 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
E2F3O00716 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
E2F3O00716 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
E2F3O00716 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
E2F3O00716 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
E2F3O00716 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
E2F3O00716 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.58□□□□□ -0.08
E2F3O00716 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
E2F3O00716 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
E2F3O00716 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
E2F3O00716 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
E2F3O00716 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
E2F3O00716 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.58□□□□□ -0.08
E2F3O00716 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
E2F3O00716 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.58□□□□□ -0.08
E2F3O00716 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
E2F3O00716 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.58□□□□□ -0.08
E2F3O00716 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.58□□□□□ -0.08
E2F3O00716 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
E2F3O00716 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
E2F3O00716 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.58□□□□□ -0.08
E2F3O00716 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.58□□□□□ -0.08
E2F3O00716 ENPP7P5-201ENST00000541031 1031 ntBASIC14.58□□□□□ -0.08
E2F3O00716 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.58□□□□□ -0.08
E2F3O00716 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
E2F3O00716 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.58□□□□□ -0.08
E2F3O00716 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
E2F3O00716 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.58□□□□□ -0.08
E2F3O00716 AL033527.4-201ENST00000641026 673 ntBASIC14.58□□□□□ -0.08
E2F3O00716 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
E2F3O00716 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
E2F3O00716 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
E2F3O00716 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
E2F3O00716 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
E2F3O00716 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
E2F3O00716 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
E2F3O00716 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
E2F3O00716 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
E2F3O00716 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
E2F3O00716 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
E2F3O00716 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.58□□□□□ -0.08
E2F3O00716 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
E2F3O00716 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.57□□□□□ -0.08
E2F3O00716 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.57□□□□□ -0.08
E2F3O00716 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.57□□□□□ -0.08
E2F3O00716 AC006504.5-208ENST00000588784 2401 ntBASIC14.57□□□□□ -0.08
E2F3O00716 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
E2F3O00716 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms