Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 PIN1P1-201ENST00000412108 996 ntBASIC12.05□□□□□ -0.48
SRRM4A7MD48 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 AC022447.6-201ENST00000515522 438 ntBASIC12.05□□□□□ -0.48
SRRM4A7MD48 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 WASH4P-201ENST00000564273 1246 ntBASIC12.05□□□□□ -0.48
SRRM4A7MD48 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 AP001063.1-201ENST00000568332 529 ntBASIC12.05□□□□□ -0.48
SRRM4A7MD48 AC138761.1-201ENST00000584393 385 ntBASIC12.05□□□□□ -0.48
SRRM4A7MD48 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRRM4A7MD48 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SRRM4A7MD48 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 AC152010.1-201ENST00000415779 2006 ntBASIC12.04□□□□□ -0.48
SRRM4A7MD48 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 AC003102.2-201ENST00000589195 1469 ntBASIC12.04□□□□□ -0.48
SRRM4A7MD48 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 AC104581.4-201ENST00000623126 3052 ntBASIC12.04□□□□□ -0.48
SRRM4A7MD48 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 MSTO2P-201ENST00000314835 1709 ntBASIC12.04□□□□□ -0.48
SRRM4A7MD48 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.04□□□□□ -0.48
SRRM4A7MD48 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 AC022137.2-201ENST00000503482 481 ntBASIC12.04□□□□□ -0.48
SRRM4A7MD48 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 MIR4745-201ENST00000577608 62 ntBASIC12.04□□□□□ -0.48
SRRM4A7MD48 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 KRT8P35-201ENST00000483942 1338 ntBASIC12.04□□□□□ -0.48
SRRM4A7MD48 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SRRM4A7MD48 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SRRM4A7MD48 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 AL928921.2-201ENST00000641325 2442 ntBASIC12.03□□□□□ -0.48
SRRM4A7MD48 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SRRM4A7MD48 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms