Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 AC005237.2-201ENST00000434368 219 ntBASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 ACTG1P14-201ENST00000446382 1122 ntBASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 AC009078.2-202ENST00000463353 338 ntBASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 AL035456.1-201ENST00000456064 1369 ntBASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV18A0A075B6X5 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 YBX2P1-201ENST00000394192 760 ntBASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 TMEM198B-204ENST00000484016 896 ntBASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 AL079307.3-201ENST00000556114 283 ntBASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 PCDHA5-203ENST00000614258 4248 ntBASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TRAV18A0A075B6X5 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRAV18A0A075B6X5 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.35
TRAV18A0A075B6X5 IL9RP2-201ENST00000423948 1312 ntBASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms